Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0894 ATGAGGTTACTCAGTTTCATAGAACAATGGAGAGGCGTTGTGAAGGAAATGGTGGATCGCACAGCGATGACAGTGAGGTTCCTCTGCTTGCTTCACGTAACCAACAACTACCTTTGCTCTCCAACTCACGTGTACGGGCCTAGTATGCTCCCCACCTTGAATATTACCGGCGATGTGCTACTTGCCGAGCATGTGTCTCCTCGACTGGGGAAGCTTGGGCCTGGAGATTTGGTGCTGGTTCGCTCTCCAATGAACCCTAATCGGACTTTGACCAAACGTATCGTGGGCATGGAAGGGGATAGGGTCACTTACTTTGATCCTAGGCTCGGTGATACAGCTCAAATTGCTGTGGTGCCAAAGGGGCATGTCTGGATTCAGGGGGATAACATCTATGCCTCCCGTGATTCAAGGCATTTTGGTCCTGTCCCTTGTGGTCTTATAGAAGGAAAAGTGTTTTTCAGGATCCAATGTATGTACTGGAATCGGTCTAGCGGTTGCAGTCATTTGTTTGGCCACCTGATAGTTTTGGACAGCTGGGTTGTTGAGCATATTGAAGATAGCATAAAGAAGAACAGAACTGATGGTCAGTCATCAAGTGAAGTGCATTAA 609 0.4795 MRLLSFIEQWRGVVKEMVDRTAMTVRFLCLLHVTNNYLCSPTHVYGPSMLPTLNITGDVLLAEHVSPRLGKLGPGDLVLVRSPMNPNRTLTKRIVGMEGDRVTYFDPRLGDTAQIAVVPKGHVWIQGDNIYASRDSRHFGPVPCGLIEGKVFFRIQCMYWNRSSGCSHLFGHLIVLDSWVVEHIEDSIKKNRTDGQSSSEVH 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0894 202 Gene3D Umud Fragment, subunit A 34 167 - -
Glsi14g0894 202 SUPERFAMILY LexA/Signal peptidase 37 155 IPR036286 -
Glsi14g0894 202 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 9 158 - -
Glsi14g0894 202 Pfam Signal peptidase, peptidase S26 22 107 IPR019533 GO:0004252|GO:0006465
Glsi14g0894 202 Pfam Signal peptidase, peptidase S26 114 154 IPR019533 GO:0004252|GO:0006465
Glsi14g0894 202 CDD S26_SPase_I 40 151 IPR019533 GO:0004252|GO:0006465
Glsi14g0894 202 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Glsi14g0894 202 PRINTS Bacterial leader peptidase 1 (S26A) family signature 37 53 IPR000223 GO:0006508|GO:0008236|GO:0016020
Glsi14g0894 202 PRINTS Bacterial leader peptidase 1 (S26A) family signature 90 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Glsi14g0894 202 FunFam Inner membrane protease subunit 1 35 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0894 Glsi-ChrGlsi14 10474065 10477055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0894 49 155 MADS-box Gene Family AT1G29960 53.704 4.30e-35 119