Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0885 ATGCCTGAGGCGCATAACTCTTTGGAAGTTTTCCAGAGAAGGACGGAAGAACGGGAAAAGGATAGGAAGAAAGAGGAAGAAGAAGTACCTAAACATTCGGTTTTGGTTGGGATGGCAGATGAAGACGAAGCCTTGAAGGCGGTGTTGGAGGAAGTTGTGGATTTGGTTCCGAAACAGAGCAACCCATTTCTCGGAATTTTTTCCCATGTGCTAGTGAATTGTTTTAGGACTGTTGTGTGTTTCTCGTACCGTATTTTCTTTTTCTTGTGCTTTCTTCATGGGAGTGTTGAGTTGGTGGGGGATTTTGCATTTTGTTTTGTCGACAACGTACCGCTTGAGGAGGTTTGTCAGACCCTGAGATGTGATACATATGGGCTCACAACAGAAGCTGCTAAGGAGAGGTTGGCCATCTTTGGGTACAACAAACTCGAGGAGGAGGATAAGTCTGCTCTCACAGGCGAATCCCTTCCTGTGACGAAAGGACCGAGTGACAGTGTTATTCAGGCTCTACATGCAAACAGGGTGAGATAG 531 0.4614 MPEAHNSLEVFQRRTEEREKDRKKEEEEVPKHSVLVGMADEDEALKAVLEEVVDLVPKQSNPFLGIFSHVLVNCFRTVVCFSYRIFFFLCFLHGSVELVGDFAFCFVDNVPLEEVCQTLRCDTYGLTTEAAKERLAIFGYNKLEEEDKSALTGESLPVTKGPSDSVIQALHANRVR 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0885 176 Pfam Cation transporter/ATPase, N-terminus 109 148 IPR004014 -
Glsi14g0885 176 Coils Coil 8 28 - -
Glsi14g0885 176 MobiDBLite consensus disorder prediction 9 30 - -
Glsi14g0885 176 MobiDBLite consensus disorder prediction 1 30 - -
Glsi14g0885 176 SUPERFAMILY Calcium ATPase, transmembrane domain M 110 147 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0885 Glsi-ChrGlsi14 10400403 10403982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0885 107 149 Primary Pumps ATPases AT5G62670 65.116 6.93e-13 63.9