Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0883 ATGTTCTCTTTCGCTTACCCTTTTCTACTCCATGAGATTCCTCACTTTATATATATGCCAGCTAGACACAAGCACTTAGACAGAACAGTAAGAGAAATGTTTGAAGCGTCACCCTCAGTTGCCACAACCGCAGTCTGTGTTGCCACAGTGACACTAATAATATGGGCATGGAAGGTAGTGAACTGGTTATGGCTGAAACCAAAGAGGCTAGAGAGGGTGCTAAGAGAGCAGGGTCTCCAAGGCAATCCTTATCGATTCTGGGTTGGGGACTTAAAGAAAATGCTTGAGATGGAAGATGAAGCCAAATCCAGACCCATGAGTCTTTCCGATGATATAGCACCCCATGTCTTCTCCTTTGTCCATCTCACTGTCAACAAATATGGCAAGAATTCATTTATGTGGTTTGGGACGAGACCAAGATTGATCATAATGGATCCGGATCAAATAAAGGATATCTTTAACAGGAACCATGACTTCCCAAAACCTGAGTTCAATCCTCTTATCAGGTTCATAGCCACTGGCCTTGCAAACTATGAAGGTCAGAAGTGGGCTAAACACAGAAAGATTATCAACCCAGCATTCAATTTAGAAAAATTGAAGATTATGCTGCCAACCTTTTTCCAAAGTTCCAATGATATGATATGCAAGTGGGAGAAAATGTTATCTTCATCGTCAGATGGATCATGTGAAATGGATGTCTGGCCTTTTCTGACAAATTTGACTAAGGATGTTATTTCTCGAGCAGCGTTTGGAAGTAGCTATGAAGAGGGCCGAAAAATATTCCAACTTTTGACAGAGCAATTTGAGCTAGTAAAGACAAGTGTACGGACAATTCACATTCCATGGTGGTGGCTCGTACCCACCAAGACCAACAGAAGGATGAAGGAAATTGATAGAAACATACAAGTTTTACTAAAGGGTATCATCAACAAGAAAGAGAAAGCAATGAAAGCAGGTGAAGCCACTAAGGATGACTTATTAGGCATACTTTTGAAATCCAATCACAAGGAAATTCAAGAACATGGAAACAAAAAGAATGTTGGGTTTACTATTGATGACGTAATCGAAGAATGCAAGCTCTTCTACTTTGCAGGGCAAGAGACCACTTCCGTTTGGCTTGTATGGACTATGGTGTTGTTGAGTAGGTACCCTGATTGGCAAACACGTGCAAGGGAGGAAGTCTTGCAAGTCTTTGGCAACCAAAAACCAGACTTTGATGAGCTAAGTCGCCTTAAGATTGTGACCATGATTTTGTATGAGGTTCTCAGGCTATATCCATCAGTACTTGGACTGACGCGAACTGTTCCCAGGGATATGAAACTTGGAAACCTGACAATTCCTGCCGGAGTGCAGCTTTCCCTACCAACAGTTTTGATTCACCATGACTGTGAATTATGGGGTGATGATGCAAAGGAGTTCAAACCAGAGAGGTTCTCAGAAGGAGTTTTAAAGGCAACGAAAGGGCAAGTTTCATTCTTCCCATTTGGATGTGGCCCTAGGATATGCATTGGGCAAAACTTTGCCATGCTGGAAGCAAAGTTGGCTATATCTATGATTCTGCAACATTTCTCGTTTGAGCTTTCCCCGGCCTATGCCCATGCTCCAACCTCTTTAATTACTCTTCAGCCTCAATATGGTGCTCAAATTATTTTACGTAAACTGTAA 1665 0.4192 MFSFAYPFLLHEIPHFIYMPARHKHLDRTVREMFEASPSVATTAVCVATVTLIIWAWKVVNWLWLKPKRLERVLREQGLQGNPYRFWVGDLKKMLEMEDEAKSRPMSLSDDIAPHVFSFVHLTVNKYGKNSFMWFGTRPRLIIMDPDQIKDIFNRNHDFPKPEFNPLIRFIATGLANYEGQKWAKHRKIINPAFNLEKLKIMLPTFFQSSNDMICKWEKMLSSSSDGSCEMDVWPFLTNLTKDVISRAAFGSSYEEGRKIFQLLTEQFELVKTSVRTIHIPWWWLVPTKTNRRMKEIDRNIQVLLKGIINKKEKAMKAGEATKDDLLGILLKSNHKEIQEHGNKKNVGFTIDDVIEECKLFYFAGQETTSVWLVWTMVLLSRYPDWQTRAREEVLQVFGNQKPDFDELSRLKIVTMILYEVLRLYPSVLGLTRTVPRDMKLGNLTIPAGVQLSLPTVLIHHDCELWGDDAKEFKPERFSEGVLKATKGQVSFFPFGCGPRICIGQNFAMLEAKLAISMILQHFSFELSPAYAHAPTSLITLQPQYGAQIILRKL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0883 554 PRINTS P450 superfamily signature 364 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0883 554 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0883 554 PRINTS P450 superfamily signature 493 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0883 554 PRINTS P450 superfamily signature 502 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0883 554 PANTHER CYTOCHROME P450 FAMILY MEMBER 54 547 - -
Glsi14g0883 554 PRINTS E-class P450 group I signature 240 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0883 554 PRINTS E-class P450 group I signature 373 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0883 554 PRINTS E-class P450 group I signature 124 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0883 554 PRINTS E-class P450 group I signature 492 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0883 554 PRINTS E-class P450 group I signature 502 525 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0883 554 PRINTS E-class P450 group I signature 353 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0883 554 SUPERFAMILY Cytochrome P450 115 552 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0883 554 Pfam Cytochrome P450 115 530 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0883 554 FunFam Cytochrome P450 734A1 64 554 - -
Glsi14g0883 554 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 495 504 IPR017972 GO:0005506|GO:0016705
Glsi14g0883 554 Gene3D Cytochrome P450 63 554 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g0883 554 CDD CYP72 117 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0883 Glsi-ChrGlsi14 10376340 10379048 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0883 39 554 Cytochrome P450 AT3G14690 56.589 0.0 617