Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0845 ATGTATATAACGCAATTGAACGTATTGTTTTTCTTCCCACAATTGCCCCCCATCTTAGAAACGTTCTCTTTTCCACTGTTCCAGTCTCCATTCCCTTTACAGATAATGTGTAGAAAGATGATGACACTTTTCTCTCCTTTTGTCACAAGTGGGCATCAAATGTTCATATTAACCGCTAGACCTCAATTGGCAGGAGATGGTATATTGGAGCTTGAGACGGGAGAGGGGAAAAAGGGCCGAGAGAGCGATGCGATTGCGGTGGTCGTGGTGGCGTTGCTGCAGCTGGTCAGGGTTTATCTCTCCTCCGACGACGTCCAATGCACCGGAGCAAACGGCGGAAGGTCGTCGTCGTTGATGGCCTTACAATTGCAGATGACTTGGCTGCCGAGTGTATTCAGTCAGAAGCGCAAGACCGATCACCCTGTAGGCCTCAGGAACCTCGGCAACTCTTGCTACCTCAACAGCGTCCTCCAGTGCCTCACCTACACTCCTCCTCTCGCCAATTACTGCCTCCGAAGCCAGCACTCTATCCATTGCGATTCTGCTTCGGAGGACAGGAAGCGGGACTGCCCTTTTTGTCTACTAGAGAAGCGGATTGCTCGTTCTTTGAGAGTGGATCTCGCCCAAGACGCCCCCTTGAAGATCCAGAGCTGTCTCAGGATTTTTGCCGAGCACTTTCGGTGTGGGCGCCAGGAGGATGCCCACGAGTTCTTAAGGTACGTTATCGACGCCTGCCACAACACCTGTCTTCGCCTCAAGAAGCTGAGGCGCAAGGGAGGCGATACTGCCGTCAATGGAAGCGGCAATACTGTGGTTAAGGAGATATTTGGGGGAGCCTTGCAGAGCCAGGTGAAGTGTCTCTCTTGTGGCTCCGAGTCCAATAAAGTTGATGAGATTATGGATATTAGTCTTGATGTTTTGCATAGTAATTCGCTTAGAGACGCTATGCAAAAGTTCTTTCAGCCCGAGGTTTTAGATGGTAATAATAAGTACAAATGTGACAATTGTAAGAAATTGGTGGCGGCTAAGAAACAAATGTCTATACTTCAAGCACCTAATGTCCTTGTAATACAACTTAAGAGATTTGAGGGCATATTGGGTGGCAAGATTGATAAGGCTGTTGCATTTGAAGACGTTTTGGTGCTTTCTAGCTTCATGTGCAAAGCAAGCCAGGATCCACTACCAGAATATAAGCTCTTTGGTACTATTGTCCATTCAGGATACTCCCCAGAATCTGGCCATTATTATGCCTATATAAAGGATGCAAAGGGCCGGTGGTATTGCTGTGATGATTCTTCTGTATCACTTGCAACCCTGAAAGAGGTTCTGTCAGAAAAGGTTTACATACTTTTTTATTCTCGCACTAACCAAAGGCCAGTGCCAATTAATAATGGTCTTGCTTCAAACGGTTTAAAGTCTCATCATTATAATGGAAGTCAGGCATCTGAATGCTCAAAAATTGATGTACCACTGAAAGTAGTGCATGCAAAATCAAATTCTCAGCAATCTCCTTGGAAGGACATGCCAACCATATCTAAGATTGATAAAGAGCTTTCTATCCCACGAGTGAAGTTTAATTTTAATGGAAATTCTACTTCCAAAAGATGTCATGAAAGTGTCAATGGGAAAGTTGATGTTTTGAAGAACGAGCCTGATGTTATAAATGGGTATGTGAAAGACTCTGTTTCTTTGGAGAATGCTAAGATAGGTCCTTCATCTATCAGGAATGGTTTTGAGAAAAATAAAGTTGATGTTGCTGACAACTCAAAAAGGAAAGATTCAGTGTTAACAAATAAAAACACTGGTAATCGGACAATTGATATATATCCTGGAAAATCAGATCTAATGGAAGATACTGTTAGAAGCAGGGTAATAACTGGTAGAAGACCTGACACATGTAAGCTAGAAAGCAATGGCCTCAACAAGAAACCTAAAACATTGGGGAATAAGAGAAAGGTATTGGAGGATCCCTGCATTTTGCTTGCACATGATGGTCAGACTCAAGCAAGAGTTCAAGAACTGAAAGACATACTTGAGAAAGAGGCAAAGTCGGTTTTGAGATCATGTGGCTGGACAGATAAGGTTTATGGCTTTATGTCCTCTAGAAAGAAGTTGCGTGCACAAGAAGCAGGAAATTCATCAAGTGAAGATGAAATGAAGAAGTTGTTAATAGGTGACGCCAAGGGAGTTTGCTTATCACAGATACCTGAGTCATTGAAGGAGGATCTGGTTGATCGTCTCAGATTATTTAGCGAAGAAAAAGTACAACTTGGAGGACCCTGA 2283 0.4367 MYITQLNVLFFFPQLPPILETFSFPLFQSPFPLQIMCRKMMTLFSPFVTSGHQMFILTARPQLAGDGILELETGEGKKGRESDAIAVVVVALLQLVRVYLSSDDVQCTGANGGRSSSLMALQLQMTWLPSVFSQKRKTDHPVGLRNLGNSCYLNSVLQCLTYTPPLANYCLRSQHSIHCDSASEDRKRDCPFCLLEKRIARSLRVDLAQDAPLKIQSCLRIFAEHFRCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGDTAVNGSGNTVVKEIFGGALQSQVKCLSCGSESNKVDEIMDISLDVLHSNSLRDAMQKFFQPEVLDGNNKYKCDNCKKLVAAKKQMSILQAPNVLVIQLKRFEGILGGKIDKAVAFEDVLVLSSFMCKASQDPLPEYKLFGTIVHSGYSPESGHYYAYIKDAKGRWYCCDDSSVSLATLKEVLSEKVYILFYSRTNQRPVPINNGLASNGLKSHHYNGSQASECSKIDVPLKVVHAKSNSQQSPWKDMPTISKIDKELSIPRVKFNFNGNSTSKRCHESVNGKVDVLKNEPDVINGYVKDSVSLENAKIGPSSIRNGFEKNKVDVADNSKRKDSVLTNKNTGNRTIDIYPGKSDLMEDTVRSRVITGRRPDTCKLESNGLNKKPKTLGNKRKVLEDPCILLAHDGQTQARVQELKDILEKEAKSVLRSCGWTDKVYGFMSSRKKLRAQEAGNSSSEDEMKKLLIGDAKGVCLSQIPESLKEDLVDRLRLFSEEKVQLGGP 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0845 760 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 397 415 IPR018200 GO:0004843|GO:0006511
Glsi14g0845 760 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 143 158 IPR018200 GO:0004843|GO:0006511
Glsi14g0845 760 Pfam Ubiquitin carboxyl-terminal hydrolase 142 452 IPR001394 GO:0004843|GO:0016579
Glsi14g0845 760 SUPERFAMILY Cysteine proteinases 135 454 IPR038765 -
Glsi14g0845 760 Gene3D Cysteine proteinases 135 457 - -
Glsi14g0845 760 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 142 455 IPR028889 -
Glsi14g0845 760 CDD Peptidase_C19E 141 453 - -
Glsi14g0845 760 FunFam Ubiquitin carboxyl-terminal hydrolase 25 136 457 - -
Glsi14g0845 760 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 109 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0845 Glsi-ChrGlsi14 9915157 9923458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0845 141 459 Miscellaneous Gene Families AT2G24640 38.957 1.33e-62 216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0845 14 9915157 9923458 Glsi14g0845 14 9915157 9923458 ECH