Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0844 ATGGCTTCTTCCCAAAACTTCAACTTTGAAACCCAAATTCCAGAAGAACTTCTTATAGCTCAGATCATGCAACTTCATGCAAGCATATCTAAGCTAGAATCCCTTAGGCCTTCTAAGCAAGTCAATACCCTCTTCACGAACCTAGTCAAACTCTGCACTATCCCTTCTTCCATAGACATCCAGGCCTTGGCCCAAGAGGAGCAGATTATGAGGGAGAATCTTATTAACCTTTGTGGCCAAGCTGAAGGCCTTTTGGAGCTAGAATTCTCAACATTCCTTGCCCGAATACCCAAACCCTTGAACAACCTCAGTCTCTTCCCATACTATGGGAACTACGTTAAACTAGCAGGCTTGGAGAACAGAATCCTCAGAGAAAATGGGGTGGTAAATCCCAAGAAGGTTGCCTTCGTAGGGTCGGGTCCAATGCCACTCACTTCCATCATAATGGCTACACATCATTTGGTCTCAACCCAATTCGACAACTTTGATATTGACAAGAAAGCCAATGAGGCAGCTCGTAGGATTGTTGCTACAGATTCGGAGCTTGAGAAGAGGATGAAGTTTGAGACAGAGGATATCATGGAAGTGAGAGAGAAGTTGGGGCAATATGATTGTGTCTTCTTAGCAGCTCTTGTGGGCATGAGCAGAGAAGCAAAAGTGAAGATTTTGGGACATCTAAGAAAGTTTATGAAGGAAGGAGGTATTTTGCTTGTGAGAAGTGCAAAAGGGGCCAGAGCTTTCTTGTACCCTGTTGTTGAGGATCATGACATGGTGAGTTTTGAGGTGCTTACAATCTTTCATCCCACAGACGATGTCATCAACTCAGTTGTTCTTCTTCGCAAGCCTGTAATGTAG 855 0.4409 MASSQNFNFETQIPEELLIAQIMQLHASISKLESLRPSKQVNTLFTNLVKLCTIPSSIDIQALAQEEQIMRENLINLCGQAEGLLELEFSTFLARIPKPLNNLSLFPYYGNYVKLAGLENRILRENGVVNPKKVAFVGSGPMPLTSIIMATHHLVSTQFDNFDIDKKANEAARRIVATDSELEKRMKFETEDIMEVREKLGQYDCVFLAALVGMSREAKVKILGHLRKFMKEGGILLVRSAKGARAFLYPVVEDHDMVSFEVLTIFHPTDDVINSVVLLRKPVM 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0844 284 PANTHER NICOTIANAMINE SYNTHASE 3 14 282 IPR004298 GO:0030410|GO:0030418
Glsi14g0844 284 CDD AdoMet_MTases 162 238 - -
Glsi14g0844 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 11 284 IPR004298 GO:0030410|GO:0030418
Glsi14g0844 284 Gene3D Vaccinia Virus protein VP39 17 282 IPR029063 -
Glsi14g0844 284 Pfam Nicotianamine synthase protein 15 282 IPR004298 GO:0030410|GO:0030418
Glsi14g0844 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 240 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0844 Glsi-ChrGlsi14 9911691 9912545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0844 17 281 Nicotianamine Synthase Gene Family AT5G56080 53.731 1.51e-97 288