Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0833 ATGGCCACCCCTAGATTCTTTTTGCTTTTTCTAAGCGAAATGGCAATAGAGTGGGATTTCAAATTCCAAAAAGGGTTTCACTCGATGCTTATATTTTGTTTTGGCATCGTTCTTGTAACTTCGATTAATGAAGAGGGTTCAAATCTTTTGCAGTTTAAAGGTTCCCTTTTTGACCCACAAAATAATCTTCATAACTGGAATTCTTCTGACTTGACTCCTTGCAATTGGAATGGTGTACATTGCACTGATTCAATGGTAACTTCTGTAAATCTTTCTCACCTTAATCTGTCTGGTGCTTTATCACCTAGCATCTGTAATCTTCCTCGACTAGTTGAGTTGAATCTATCAAAAAATCTTATTTCTGGCCCTATTCCTGTGGATTTTGTTGACTGTCGTGGGATAGAGATATTAGACCTATGTACAAATAGGTTCCACGGAGAACTTCTGACACCTTTCTGCAAAATCACCACACTTAGAAAGCTTTACCTCTGTGAAAATTATATGCATGGTGAAGTCCCTGAAGAGATTGGGAATTTAGCTTCACTCGAAGAGCTAGTTATTTATAGCAATAACTTGACTGGAAGAATTCCCACATCAATCCGTAAATTGAAGCAGCTCAAAATTGTCAGGGCAGGCCTGAATAGCCTCTCAGGTCCAATACCTGCAGAAATAAGCGAGTGTGAGAACTTGGAGGTATTAGGGTTGGCACAGAATCTGCTAGAAGGATCCATTCCAAGGGAGCTTCAAAAGCTTCAGAACCTTACTAATTTAATTTTATGGCAAAACTGTCTATCTGGTGAGATTCCTCCTGAGATTGGAAATATCAGTAGCCTGCAGTTGCTTGCGATGCATCAGAATTCATTTAGTGGAGCTCTCCCCAAGGAGCTGGGAAAGTTATCCAAATTACAGAAGTTGTATATATACACTAACCACTTGAATGGCACAATTCCGCTGGAGTTAGGGAACTGTACAAGTGCTATTGAGATAGATCTATCTGAAAATCGGTTGAGTGGGATTGTTCCCAAAGAGTTTGGTCAGATCTCAAATCTTATCTTGCTTCAGCTATTTGAAAACCTTCTGCAGGGACAGATACCTCAGGAGCTCGGGCAGTTAAGGCTGCTAAAGAAATTAGACCTGTCAATGAATAACTTAACTGGCACAATTCCGCTAGTGTTTCAAAATCTTACAAACATGGAGGATTTGCAGCTATTTGACAATCAACTTGAGGGTAAGATTCCTCCTCATCTTGGAGCAAATAGCAACCTCACTATTCTTGACATATCTGCAAATAATCTTGTTGGTATGATTCCTCCTCATCTTTGCCAACGTCAGAAACTGCAATTTCTGAGCCTTGGGTCAAATAGGTTGCTTGGTAATATTCCATATGACCTGAAAACATGCAAGTCTCTTGTGCAGCTAATGCTGGGGGACAACCAGCTGACAGGAAGCTTCCCTGTTGAATTACATGAACTTCATAATCTTTCTGCACTTGAACTTTATCAGAATCGATTCTCTGGGCTAATAAACCATGGGATAGGTCAGCTAAGGAATTTAGAGAGGCTTCTCTTATCAGATAATTATTTTGTTGGATATCTCCCTTCTGAGATTGGAAATTTAGCCCAGCTGGTCTCATTCAACATTTCCTCCAATTATCTCAGTGGAAGTATACCTCATGAGTTGGGCAACTGTGTGAAACTACAAAGGCTTGATCTTAGTAGGAATCAGTTCACTGGTGAACTTCCAGATGATATTGGCAAGCTGGTGAATCTGGAGCTGTTGAAACTTTCAGATAATAGATTCTCTGGAGCTATACCAAGCACTTTAGGTGATCTTACTCGTCTCACGGAGCTGGAACTAGGTGGCAACTTATTTTCTGGAAGCATTCCTTTTCATTTGGGACAACTAGCTGCTCTTCAGATTGCCCTTAACATGAGCCATAACAAACTCTCTGGTGCAATTCCTGACAGCCTGGGGAACTTGCAAATGTTGGAATCCCTTTATTTAAATGACAATCAACTTGTTGGTGAAATTCCTACGTCAATTGGTGACCTCCCCAGCCTTTTAGTATGCAATGTCTCTAACAATAACTTGGTAGGAACTGTTCCAAACACCCCTGCATTCCGAAGGATGGATTTTACAAATTTTGCTGGAAACAATGGTTTGTGCCGTGTAGGTTCATATAATTGTCATCCTTCTATTTCTTCATCTCATACTCCAAAACCAAGCTGGATCAGCGATAGTTCATCAAGGGAAAAGATAGTGAGCATTGTTTCTGGAGTAATTGGATTTGTTTCTCTTATTTTCATAGTCTGTATATGCTGGATGATGAAGCGCCGTCGCCCTGCTTTTGTCTCACTTGAAGAGCAAACAAGGCCTCACGCTCTAGATAACTATTACTTTCCTAAAGAAGGTTTCACATACCAGGATCTCTTGGAAGCCACTGGCAATTTTTCAGAAGCAGTAGTTATAGGAAGAGGAGCTTGTGGGACTGTCTACAAGGCTGTTATGACTGATGGTGAGGTGATTGCTGTCAAAAAGCTGAATTCTCGTGGAGAAGGAGCAAATGTTGACAGAAGCTTCCTCGCAGAAATTTCAACTCTTGGAAAGATCAGGCACAGAAATATCGTGAAGCTGTATGGATTCTGTTACCATGAGGATTCTAATATTCTCTTATATGAATACATGGAAAATGGCAGCCTTGGGGAACTACTTCATTCAAATCCAAACACGTGCTTACTGGATTGGAGTAGTAGATATAAAATTGCTCTTGGAGCAGCAGAAGGCTTGAGCTATCTTCATTATGACTGTAAACCTCAAATCATCCACCGTGACATAAAGTCAAACAATATACTGCTCGATGAAGTGTTTCAGGCTCACGTTGGAGACTTCGGCTTGGCAAAGTTGATTGACTTTTCCTATTCTAAATCCATGTCTGCTGTGGCAGGTTCATATGGCTACATTGCCCCCGAATATGCTTACACCATGAAGGTGACCGAGAAATGTGACATCTATAGCTTTGGGGTAGTTTTGCTGGAACTAGTTACTGGGAGATCACCCGTTCAACCTTTGGAACAGGGTGGTGATCTAGTTACTTGGGTGAGAAGATCAATTCAAGCAGCAGTGCCAACATCTGAATTATTTGACAAGAGATTGAATCTGAGTGCACAAAGAACAATAGAAGAGATGGCTCTTGTTCTCAAAATTGCTCTATTTTGCACCAGTACATCTCCACTCAATAGGCCAACAATGAGAGAGGTCATTGCAATGTTGATTGATGCTAGGGAGTATGTCAGCAATTCTCCATCAACTCCTACATCTGAATCACCACTAGATGAAGATGTTTCTTCCAAAGATGGTCTTGAGTTGTAA 3369 0.4078 MATPRFFLLFLSEMAIEWDFKFQKGFHSMLIFCFGIVLVTSINEEGSNLLQFKGSLFDPQNNLHNWNSSDLTPCNWNGVHCTDSMVTSVNLSHLNLSGALSPSICNLPRLVELNLSKNLISGPIPVDFVDCRGIEILDLCTNRFHGELLTPFCKITTLRKLYLCENYMHGEVPEEIGNLASLEELVIYSNNLTGRIPTSIRKLKQLKIVRAGLNSLSGPIPAEISECENLEVLGLAQNLLEGSIPRELQKLQNLTNLILWQNCLSGEIPPEIGNISSLQLLAMHQNSFSGALPKELGKLSKLQKLYIYTNHLNGTIPLELGNCTSAIEIDLSENRLSGIVPKEFGQISNLILLQLFENLLQGQIPQELGQLRLLKKLDLSMNNLTGTIPLVFQNLTNMEDLQLFDNQLEGKIPPHLGANSNLTILDISANNLVGMIPPHLCQRQKLQFLSLGSNRLLGNIPYDLKTCKSLVQLMLGDNQLTGSFPVELHELHNLSALELYQNRFSGLINHGIGQLRNLERLLLSDNYFVGYLPSEIGNLAQLVSFNISSNYLSGSIPHELGNCVKLQRLDLSRNQFTGELPDDIGKLVNLELLKLSDNRFSGAIPSTLGDLTRLTELELGGNLFSGSIPFHLGQLAALQIALNMSHNKLSGAIPDSLGNLQMLESLYLNDNQLVGEIPTSIGDLPSLLVCNVSNNNLVGTVPNTPAFRRMDFTNFAGNNGLCRVGSYNCHPSISSSHTPKPSWISDSSSREKIVSIVSGVIGFVSLIFIVCICWMMKRRRPAFVSLEEQTRPHALDNYYFPKEGFTYQDLLEATGNFSEAVVIGRGACGTVYKAVMTDGEVIAVKKLNSRGEGANVDRSFLAEISTLGKIRHRNIVKLYGFCYHEDSNILLYEYMENGSLGELLHSNPNTCLLDWSSRYKIALGAAEGLSYLHYDCKPQIIHRDIKSNNILLDEVFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVTWVRRSIQAAVPTSELFDKRLNLSAQRTIEEMALVLKIALFCTSTSPLNRPTMREVIAMLIDAREYVSNSPSTPTSESPLDEDVSSKDGLEL 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0833 1122 Pfam Leucine rich repeat N-terminal domain 43 81 IPR013210 -
Glsi14g0833 1122 Gene3D Ribonuclease Inhibitor 41 194 IPR032675 -
Glsi14g0833 1122 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 895 1107 - -
Glsi14g0833 1122 Pfam Protein kinase domain 819 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0833 1122 SUPERFAMILY Protein kinase-like (PK-like) 797 1090 IPR011009 -
Glsi14g0833 1122 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 343 1091 - -
Glsi14g0833 1122 Gene3D Ribonuclease Inhibitor 293 391 IPR032675 -
Glsi14g0833 1122 SUPERFAMILY RNI-like 388 699 - -
Glsi14g0833 1122 SMART serkin_6 817 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0833 1122 Pfam Leucine rich repeat 516 576 IPR001611 GO:0005515
Glsi14g0833 1122 Gene3D Transferase(Phosphotransferase) domain 1 895 1108 - -
Glsi14g0833 1122 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 419 733 - -
Glsi14g0833 1122 MobiDBLite consensus disorder prediction 1098 1122 - -
Glsi14g0833 1122 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 41 195 - -
Glsi14g0833 1122 Gene3D Phosphorylase Kinase; domain 1 783 894 - -
Glsi14g0833 1122 SMART LRR_typ_2 179 203 IPR003591 -
Glsi14g0833 1122 SMART LRR_typ_2 515 539 IPR003591 -
Glsi14g0833 1122 SMART LRR_typ_2 660 684 IPR003591 -
Glsi14g0833 1122 SMART LRR_typ_2 395 419 IPR003591 -
Glsi14g0833 1122 SMART LRR_typ_2 611 635 IPR003591 -
Glsi14g0833 1122 SMART LRR_typ_2 251 275 IPR003591 -
Glsi14g0833 1122 SMART LRR_typ_2 371 394 IPR003591 -
Glsi14g0833 1122 SMART LRR_typ_2 107 131 IPR003591 -
Glsi14g0833 1122 SMART LRR_typ_2 587 610 IPR003591 -
Glsi14g0833 1122 SMART LRR_typ_2 299 323 IPR003591 -
Glsi14g0833 1122 ProSiteProfiles Protein kinase domain profile. 817 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0833 1122 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 782 894 - -
Glsi14g0833 1122 Gene3D Ribonuclease Inhibitor 392 737 IPR032675 -
Glsi14g0833 1122 ProSitePatterns Serine/Threonine protein kinases active-site signature. 940 952 IPR008271 GO:0004672|GO:0006468
Glsi14g0833 1122 Gene3D Ribonuclease Inhibitor 195 292 IPR032675 -
Glsi14g0833 1122 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 196 293 - -
Glsi14g0833 1122 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 294 388 - -
Glsi14g0833 1122 SUPERFAMILY L domain-like 45 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0833 Glsi-ChrGlsi14 9721513 9725755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0833 67 1094 Receptor kinase-like Gene Family AT1G73080 38.104 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi14g0833 Pkinase 1.3e-48 CL0016