LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi14g0832	ATGGACGAAGATCATACCTTCATCCCTCCCGATACAGATCTAGACTTCAGCTTCACCAGCTCCACCTCTGCCGCCACCGACCGCACCTTCGCTTCCTCCAGTGCTCGTACCAGCTTGGCTCGCAGCAGCTTAACTCTCAGTTTCAATGACCGTCTCTCAACTGCCTCCGCCAACACCGCAACTTCTTCTTCTACCATCTTTCTCCGCCCCCACCGCGCCTATGACCCTCATTGGTCCGCCATCAAAGCTGCTACCACTCTGTCCTCCGATGGAACTCTTCACCTACGCCACCTCAAGCTCCTCCGCCACCTAGGCACAGGGAATCTCGGCCGGGTCTTCCTCTGCCGCCTTCGCGACTACGACCACGCGAATTTTGCTCTCAAGGTGGTTGATAAGGACTTGCTGAGCAGCAAGAAGCTCTCTCACGTACAAATGGAGGCTGAGATTCTCTCCATGCTCGATCACCCTTTTCTTCCTACGCTCTACGCCCGATTAGAGGTCTCCCATTACACGTGTCTCCTGATCGATTACTGCCCCGGTGGTGACCTCCACGCCCTCCTCCTCAAACGGCCCGGAAACCGGCTTCCGGTTCAGGCGGTTCGGTTCTTCGCCGCCGAGGTGCTCGTGGCGTTGGAATATTTGCATGCGCTTGGCGTGGTTTATAGGGATCTGAAACCGGAGAACGTTCTGTTACGCGAAGACGGCCACGTCATGCTGTCCGATTTCGATTTGTGCTTCAAGGCCGAAGTGGTCCCCAAATTCGAATGTAAGGTCCACGACAGCAAATTGGGGCCCGGTAAGAACAGCAGGTGCATCTGTTTCGGTGGTGTTAACCGTCGGGAAGCAAAATCGCGGGAGCAAGTGGTGGCGGAGTTTATTGCGGAGCCAACTGCGGCGTTTTCGAGGTCATGCGTTGGAACCCACGAGTACTTGGCCCCGGAGCTCGTCTCCGGCAACGGACACGGAAACGGCGTGGACTGGTGGGCGTTTGGGGTGTTCATTTACGAGTTATTGTACGGGACGACTCCGTTTAAAGGGTGGAGCAAAGAGAGCACCCTGCGCAATATAGCCTCTACCAGGGACGTTAGTTTCCACGTCGCAGAAGTTGAGGAGGAGGGAATGGCAGAAGCAAGGGATTTGATAGAGAAGTTGCTGGTAAAGGATCCAAGGAGGAGGCTAGGATGTACGAGGGGTGCGACGGATATTAAACGACACCCGTTTTTTGGTGGGATCAAGTGGCCGTTGATCCGGACCTACAGGCCACCGGAGGTTCGGGGGCTTCTGAGGAGGGGGAGGTCGCAGTTGAGCAGTCACGTGACCCATAGGAGAAGGCGATGGTGGTGGAAGGGGCTTGATTTTCTGAAGAGAAACAGGAGATCTAAATATAATTTGATTTCCAACCATAGTAACGGTAATTACTATAATTGTGTTAATAGTAATAAGGTTCGGAAATGTGCTTGA	1461	0.5414	MDEDHTFIPPDTDLDFSFTSSTSAATDRTFASSSARTSLARSSLTLSFNDRLSTASANTATSSSTIFLRPHRAYDPHWSAIKAATTLSSDGTLHLRHLKLLRHLGTGNLGRVFLCRLRDYDHANFALKVVDKDLLSSKKLSHVQMEAEILSMLDHPFLPTLYARLEVSHYTCLLIDYCPGGDLHALLLKRPGNRLPVQAVRFFAAEVLVALEYLHALGVVYRDLKPENVLLREDGHVMLSDFDLCFKAEVVPKFECKVHDSKLGPGKNSRCICFGGVNRREAKSREQVVAEFIAEPTAAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGVFIYELLYGTTPFKGWSKESTLRNIASTRDVSFHVAEVEEEGMAEARDLIEKLLVKDPRRRLGCTRGATDIKRHPFFGGIKWPLIRTYRPPEVRGLLRRGRSQLSSHVTHRRRRWWWKGLDFLKRNRRSKYNLISNHSNGNYYNCVNSNKVRKCA	486

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi14g0832	486	Gene3D	Transferase(Phosphotransferase) domain 1	302	421	-	-
	Glsi14g0832	486	ProSiteProfiles	Protein kinase domain profile.	98	408	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Glsi14g0832	486	Gene3D	Transferase(Phosphotransferase) domain 1	182	248	-	-
	Glsi14g0832	486	Gene3D	Phosphorylase Kinase; domain 1	97	181	-	-
	Glsi14g0832	486	SMART	serkin_6	98	408	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Glsi14g0832	486	FunFam	Serine/threonine-protein kinase OXI1	299	426	-	-
	Glsi14g0832	486	SUPERFAMILY	Protein kinase-like (PK-like)	77	429	IPR011009	-
	Glsi14g0832	486	Pfam	Protein kinase domain	100	408	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Glsi14g0832	486	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	219	231	IPR008271	GO:0004672\|GO:0006468
	Glsi14g0832	486	CDD	STKc_phototropin_like	105	424	-	-
	Glsi14g0832	486	PANTHER	FLIPPASE KINASE 1-RELATED	37	425	-	-
	Glsi14g0832	486	FunFam	Serine/threonine-protein kinase OXI1	182	250	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi14g0832	Glsi-ChrGlsi14	9716497	9717957	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi14g0832	3	480	AGC Kinase Gene Family	AT3G14370	65.779	0.0	589

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Glsi14g0832		Pkinase	2.7e-54	CL0016