Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0830 ATGCTAATATTAGTGGGCAACGTTCAAGGAACAATGATTTCTCTCGCTTCCCCTGTCAGTTTGGGAGGTCTAGTTGGAGTGAGTTCCTCTGGAAGGTCCCATTCTTTTGGGCGGAGAATTTCTCTTTCTAGAGGAAACTTTAAGGGTAGAAAGAGATGGAATTGTGTATCCTTGTCCGTTTGTAAATATTCAGTGGTTACGACTGATTTCATTTCTGACCAAGGCAATGCAGTGTCCCTTGACTCTAACAGTGATAGAGAAAGTAAAGGAGGAGATGATAATGCTGCTTTTATTCTTAAGCCTCCTCCAAAGCCATTATCGAAGTCCTCAGAGACCAAGGGTGACCCCGTTTTAGGCATGAATTCCGAAGGGTGGGATTCCTCCAAAATTACTAAGCAATTTGGTGATGAGAAGTTAGATGATGTAGAAGAGAGGAATAAAGTGATTGAGTCACTTGGAGAGGTGTTGGAGAAGGCAGAAAAGCTGGAAAGATCAAAGTTGGATGGTAAAAGAGATGATGGGCCGGTAAATAAACCAGCAATATCTAGTACAATCACTAATCCTAGGATTAATAAAGTGGGAAATTCGACAACAAACCAGAAGTCTAAAACCATGAAGAGTGTATGGCGTAAAGGGGACACAGTTGCTACTGTACAGAAGGTCGCAAAGGAAGCACCCAAGCCTAATAATAAGATTGAAGGAGAGAAATCTCAAACAGGGGGAGGGGGAAAGGTAACATCACAATCTCGTGCTCCTCTAAGAGCTCCTCAAACACAGTCAAGACCTCAGCCAATGTTACAAGCTAAACCTTCTATAGCTCCCCCACCCATAAAAAAACCCATTTTGAAGGATAATGGAGCAGCTGACACACCTGCTAAAAATAAAGAAAGGAAGCCAATCTTGATTGACAAGTTTGCTACCAAGAAACCCATAGTCGATCCTCTAATTGCTCAAGCGGTTCTAGCTCCTACAAAACCTGGAAAGGGTCCTCCTCCAGGAAAGTTTAGAGATGATTACCGGAAGAAAAGTGCTCCGGGTGGAGGAGGACCAAGGAGACGAGTATTAGAGGCGGATGATGATGAGATTCCTGATGAGGACACTTCAGAACTCAATGTCTCTATTCCTGGTGCTGCAGCAGCAAGAAAAGGGAGGAAATGGAGTAAAGCAAGTAGAAAGGCTGCAAGACTACAGGCTGCCAAGGAGGCCGCTCCTGTCAAAGTAGAAATTCTGGAGGTCAGTGATAAAGGTATGCTGATTCAGGAGTTAGCCTACAACTTGGCAATCAGTGAAGGTGAAATCCTGGGTTATCTGTACTCCAAGGGGATTAAACCAGACGGGGTGCAAACTTTAGACAAAGATATGGTGAGGATGATTTGTAAAGAGCAAGGTGTGGAAGTGATAGATGCTGATCCTGTCAAAGTTGAAGGATTAGTGAAGAAAAGAGAAATTCTTGAGGAAGATGACCTTGACAAACTCAAAGATAGGCCTCCTGTCATTACTATAATGGGTCATGTGGATCATGGCAAGACAACTCTTTTGGATTATATTCGGAAGAGCAAGGTAGCTGCTTCAGAAGCTGGTGGGATTACCCAAGGAATTGGGGCATATAAAGTGCAAGTACCTGTTGATGGCAAACTGCTGCCTTGTGTTTTTCTTGACACTCCTGGGCATGAGGCATTTGGGGCAATGAGAGCTCGAGGAGCAAGTGTAACGGATATTGCTATCATTGTTGTGGCTGCTGATGATGGAATTCGTCCTCAAACTACTGAAGCCATTGCTCATGCCAAAGCGGCAGGAGTCCCTATAATTATTGCTATAAACAAGATAGATAAAGATGGAGCAAATCCAGAACGAGTTATGCAAGAGCTTTCCTCTATTGGTCTAATGCCAGAAGACTGGGGTGGTGACATCCCAATGGTTCAGATAAGTGCTCTTAAAGGGCAAAAAGTAGATGATCTTTTGGAAACTGTTATGCTTGTTGCTGAGTTGCAAGAGCTGAGAGCGAATCCTGATAAAAGTGCGAAGGGCACAGTCATTGAGGCTGGTCTGGATAAATCAAAAGGACCATTTGCAACATTTATTGTGCAGAATGGCACCCTTAAAAGGGGAGATGTAGTAGTTTGCGGAGGAGCTTTTGGAAAGGTCCGGGCTTTATTTGATGATGGTGGAAAACGTGTTGATTTAGCTACACCTTCTATACCTGTCCAGGTTATCGGATTGAATAATGTTCCAATTGCTGGTGATGAATTTGAGGTTATTGACTCCCTTGATGCTGCACGTGAAAAAGCTGAATCCCGTGTTGAGTCATTGCGAAATGAGCGTATATCAGCTAAGGCAGGAGATGGAAAGGTCACTCTTTCTTCTTTAGCTTCTGCAGTTTCAGCAGGAAGGCTTTCTGGATTAGACTTGCACCAACTTAATATTATCTTGAAGGTTGATCTTCAGGGATCTATTGAAGCTGTCAGACAAGCCCTGCAGGTGCTACCACAAGATAATGTCACATTGAAGTTTTTGTTGGAAGCAACAGGTGATGTAAGCACCAGTGATATTGACCTTGCGGTTGCAAGCAAAGCTATTATTTTGGGATTTAATGTCAGAGCACCAGGTTCTGTGAAAAGCTATGCAGAGAATAAATTTGTTGAGATTAGATTATATAGAGTTATTTATGAACTGATTGATGACGTGCGAAATGCAATGGAAGGACTCCTTGAACCTGTTGAGGAACAAGTAGCTATTGGCTCAGCAGAAGTAAGGGCCACATTCAGCAGTGGGAGTGGTCGCGTTGCTGGATGCATGGTTACAGAGGGAAAAATACTGAAAGGCTGTGGCATTAAGGTCATTCGTAAGGGAAAAGTTGTTCATGTTGGTATTCTTGATTCTTTGAGACGGGTGAAGGAGATTGTGAAAGAGGTAAATGCAGGTCTAGAGTGTGGAATTGGGTTAGAAGATTACGACGATTGGGAAGAAGGAGATATTCTTGAGGCATTCAACACAGTTCAGAAAAAGAGGACCCTTGAAGAGGCATCGGCATCAATGGCAGCTGCAGTGGAAGGTGTAGGAGTCGAATTGTAG 3072 0.4339 MLILVGNVQGTMISLASPVSLGGLVGVSSSGRSHSFGRRISLSRGNFKGRKRWNCVSLSVCKYSVVTTDFISDQGNAVSLDSNSDRESKGGDDNAAFILKPPPKPLSKSSETKGDPVLGMNSEGWDSSKITKQFGDEKLDDVEERNKVIESLGEVLEKAEKLERSKLDGKRDDGPVNKPAISSTITNPRINKVGNSTTNQKSKTMKSVWRKGDTVATVQKVAKEAPKPNNKIEGEKSQTGGGGKVTSQSRAPLRAPQTQSRPQPMLQAKPSIAPPPIKKPILKDNGAADTPAKNKERKPILIDKFATKKPIVDPLIAQAVLAPTKPGKGPPPGKFRDDYRKKSAPGGGGPRRRVLEADDDEIPDEDTSELNVSIPGAAAARKGRKWSKASRKAARLQAAKEAAPVKVEILEVSDKGMLIQELAYNLAISEGEILGYLYSKGIKPDGVQTLDKDMVRMICKEQGVEVIDADPVKVEGLVKKREILEEDDLDKLKDRPPVITIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVQVPVDGKLLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTTEAIAHAKAAGVPIIIAINKIDKDGANPERVMQELSSIGLMPEDWGGDIPMVQISALKGQKVDDLLETVMLVAELQELRANPDKSAKGTVIEAGLDKSKGPFATFIVQNGTLKRGDVVVCGGAFGKVRALFDDGGKRVDLATPSIPVQVIGLNNVPIAGDEFEVIDSLDAAREKAESRVESLRNERISAKAGDGKVTLSSLASAVSAGRLSGLDLHQLNIILKVDLQGSIEAVRQALQVLPQDNVTLKFLLEATGDVSTSDIDLAVASKAIILGFNVRAPGSVKSYAENKFVEIRLYRVIYELIDDVRNAMEGLLEPVEEQVAIGSAEVRATFSSGSGRVAGCMVTEGKILKGCGIKVIRKGKVVHVGILDSLRRVKEIVKEVNAGLECGIGLEDYDDWEEGDILEAFNTVQKKRTLEEASASMAAAVEGVGVEL 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0830 1023 PRINTS GTP-binding elongation factor signature 550 560 IPR000795 GO:0003924|GO:0005525
Glsi14g0830 1023 PRINTS GTP-binding elongation factor signature 602 611 IPR000795 GO:0003924|GO:0005525
Glsi14g0830 1023 PRINTS GTP-binding elongation factor signature 498 511 IPR000795 GO:0003924|GO:0005525
Glsi14g0830 1023 PRINTS GTP-binding elongation factor signature 566 577 IPR000795 GO:0003924|GO:0005525
Glsi14g0830 1023 MobiDBLite consensus disorder prediction 331 345 - -
Glsi14g0830 1023 FunFam Translation initiation factor IF-2 491 669 - -
Glsi14g0830 1023 Hamap Translation initiation factor IF-2 [infB]. 7 1003 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Glsi14g0830 1023 MobiDBLite consensus disorder prediction 165 304 - -
Glsi14g0830 1023 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 801 913 IPR036925 -
Glsi14g0830 1023 CDD IF2_mtIF2_II 674 766 IPR044145 -
Glsi14g0830 1023 SUPERFAMILY Translation proteins 670 753 IPR009000 -
Glsi14g0830 1023 SUPERFAMILY Translation proteins 909 1003 IPR009000 -
Glsi14g0830 1023 Pfam Translation-initiation factor 2 802 895 IPR023115 -
Glsi14g0830 1023 CDD mtIF2_IVc 913 995 - -
Glsi14g0830 1023 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 670 IPR027417 -
Glsi14g0830 1023 MobiDBLite consensus disorder prediction 232 266 - -
Glsi14g0830 1023 FunFam Translation initiation factor IF-2 670 788 - -
Glsi14g0830 1023 Pfam Elongation factor Tu GTP binding domain 499 659 IPR000795 GO:0003924|GO:0005525
Glsi14g0830 1023 FunFam Translation initiation factor IF-2 907 1004 - -
Glsi14g0830 1023 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 494 667 IPR000795 GO:0003924|GO:0005525
Glsi14g0830 1023 FunFam Translation initiation factor IF-2 802 907 - -
Glsi14g0830 1023 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 199 1011 IPR015760 -
Glsi14g0830 1023 ProSitePatterns Initiation factor 2 signature. 956 978 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Glsi14g0830 1023 Gene3D - 802 907 IPR036925 -
Glsi14g0830 1023 NCBIfam translation initiation factor IF-2 416 1005 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Glsi14g0830 1023 Gene3D Translation factors 670 786 - -
Glsi14g0830 1023 NCBIfam small GTP-binding protein domain 496 657 IPR005225 GO:0005525
Glsi14g0830 1023 MobiDBLite consensus disorder prediction 322 376 - -
Glsi14g0830 1023 Gene3D Translation factors 908 1004 - -
Glsi14g0830 1023 Gene3D - 491 669 IPR027417 -
Glsi14g0830 1023 MobiDBLite consensus disorder prediction 76 129 - -
Glsi14g0830 1023 CDD IF2_eIF5B 497 663 - -
Glsi14g0830 1023 Coils Coil 753 780 - -
Glsi14g0830 1023 MobiDBLite consensus disorder prediction 289 304 - -
Glsi14g0830 1023 MobiDBLite consensus disorder prediction 179 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0830 Glsi-ChrGlsi14 9692510 9702271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0830 473 893 Eukaryotic Initiation Factors Gene Family AT1G76810 29.158 6.67e-29 123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0830 14 9692510 9702271 Glsi14g0830 14 9692510 9702271 ECH