Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0827 ATGTTACTTAACGCCCGTCAATATTCATCTCCAGTTGATTTGTGGTCTGTTGGTTGTATATTCGGCGAGATGGTAATTGGGCAGTCTATATTCCGATCAACGAACTACAGGGATGAATTAGAGGCAATATTCAGGCTGTTACGCATTGTAGAATGCAAAATTTGCGGTCGAAGGCCGAGACCAGCGTACGAGTTGAGGGGCTGGAACTACGAGGTTCTCAACGAGATTGGAGCAGGCGGGTATGGCAAAGTTTACCGTTGTTGTAACATTAACACTGGCCAGATAGTGGCCATCAAGCAGGTTGTTCTTTTTGGCGTAAACGAAGCTGTTCCAGCCAACATAATAAGGGAAGTCTCACTTCTAAAAGAGTTAGACCCTGTCAACCTTGTCAGGTTGCTGGATGTAAAGAGCAGTGGAAAACGTGTGAGTCTCGTTTTTGAGCATCTTGACTTTAATCTTGATCATTACATAATCAGCCCAGTTTACCCTAAGGATTCCCTGACAAGATAA 510 0.4412 MLLNARQYSSPVDLWSVGCIFGEMVIGQSIFRSTNYRDELEAIFRLLRIVECKICGRRPRPAYELRGWNYEVLNEIGAGGYGKVYRCCNINTGQIVAIKQVVLFGVNEAVPANIIREVSLLKELDPVNLVRLLDVKSSGKRVSLVFEHLDFNLDHYIISPVYPKDSLTR 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0827 169 SUPERFAMILY Protein kinase-like (PK-like) 2 50 IPR011009 -
Glsi14g0827 169 ProSiteProfiles Protein kinase domain profile. 70 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0827 169 Gene3D Transferase(Phosphotransferase) domain 1 1 48 - -
Glsi14g0827 169 SUPERFAMILY Protein kinase-like (PK-like) 62 161 IPR011009 -
Glsi14g0827 169 PANTHER CELL DIVISION PROTEIN KINASE 69 157 - -
Glsi14g0827 169 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Glsi14g0827 169 Gene3D Phosphorylase Kinase; domain 1 66 149 - -
Glsi14g0827 169 Pfam Protein kinase domain 70 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0827 Glsi-ChrGlsi14 9639357 9649254 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0827 1 47 Core Cell Cycle Gene Families AT3G48750 46.809 1.23e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Glsi14g0827 Pkinase 3.8e-15 CL0016