Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0825 ATGCCTCTAAGCGATTTTGATCTAAACTCCTCTGGATCTCTGTTGCTGCGCTGTTTAGAATGCAGAATTTGGGACAGGCTGTTACGCATTGTAGAATGCAAAATTTGCGGTCGTAGGCCTGGACCAGCGTACGAGTTCAGGGGCTGGAACTACGAGGTTCTTAGCGAGATTGGAGTTGGCGGGTATGGCAAAGTTTACCGTTGTTGTAACATTAACACTGGCCAGATAGTGGCCATCAAGGAGATTGTTCTTTTTGGCGTAAATGAAGCTGTTCCAGCCAACATCATAAGGGAAGTCTCACTTCTAAAGGAGTTAGACCATGTCAACATTGTCGGTTAG 339 0.4602 MPLSDFDLNSSGSLLLRCLECRIWDRLLRIVECKICGRRPGPAYEFRGWNYEVLSEIGVGGYGKVYRCCNINTGQIVAIKEIVLFGVNEAVPANIIREVSLLKELDHVNIVG 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0825 112 SUPERFAMILY Protein kinase-like (PK-like) 44 111 IPR011009 -
Glsi14g0825 112 Pfam Protein kinase domain 51 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0825 112 ProSiteProfiles Protein kinase domain profile. 51 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0825 112 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
Glsi14g0825 112 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 43 112 - -
Glsi14g0825 112 Gene3D Phosphorylase Kinase; domain 1 47 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0825 Glsi-ChrGlsi14 9590093 9590820 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0825 50 111 Core Cell Cycle Gene Families AT3G48750 46.774 1.42e-12 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Glsi14g0825 Pkinase 1.5e-12 CL0016