Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0823 ATGTTACTTAACGTCCGTCAATATTCATCCCCAGTTGATTTGTGGTCTGTTGGTTGTATATTCGGCGAGATGGTAATTGGGCAGTCTATATTCCGATCTACGAACTACAGGAATGAAGTAGAGGCAATATTCAGGCTATTACGCATTGTAGAATGCAACATTTGCGGTCGAAGGCCGAGACCAGCGTACGAGTTGAGGGGCTGGAACTACGAGGTTCTCAACGAGATTGGAGCAGGCGGGTATGGCAAAGTTTACCGTTGTTGTAACATTAACACTGGCCGGATAGTGGCCATCAAGCAGGTTGTTCTTTTTGGCGTAAACGAAGCTGTTCCAGCCAACATAATAAGGGAAGTCTCACTTCTAAAAGAGTTAGACCCTGTCAACCTTGTCAGGTTGCTGGATGTAAAGAGCAGTGGAAAACGTGTGAGTCTCGTTTTTGAGCATCTTGACTTTAATCTTGATCATTACATAATCAGCCCAGTTTACCCTAAGGATTCCCTGACAAGATAA 510 0.4431 MLLNVRQYSSPVDLWSVGCIFGEMVIGQSIFRSTNYRNEVEAIFRLLRIVECNICGRRPRPAYELRGWNYEVLNEIGAGGYGKVYRCCNINTGRIVAIKQVVLFGVNEAVPANIIREVSLLKELDPVNLVRLLDVKSSGKRVSLVFEHLDFNLDHYIISPVYPKDSLTR 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0823 169 Pfam Protein kinase domain 70 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0823 169 Gene3D Phosphorylase Kinase; domain 1 66 149 - -
Glsi14g0823 169 ProSiteProfiles Protein kinase domain profile. 70 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0823 169 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Glsi14g0823 169 SUPERFAMILY Protein kinase-like (PK-like) 2 50 IPR011009 -
Glsi14g0823 169 PANTHER CELL DIVISION PROTEIN KINASE 69 157 - -
Glsi14g0823 169 SUPERFAMILY Protein kinase-like (PK-like) 62 161 IPR011009 -
Glsi14g0823 169 Gene3D Transferase(Phosphotransferase) domain 1 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0823 Glsi-ChrGlsi14 9542351 9549281 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0823 1 50 Core Cell Cycle Gene Families AT3G48750 42.000 7.99e-09 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Glsi14g0823 Pkinase 4.6e-15 CL0016