Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0821 ATGCCTTTGTTCGTGACTGTTTTGCGTATTTGGACCAAAAGTCAACAATTTGTGTTCTCTGAGATTAAAAAGCAGAGCAAACAGAGGAGAAAGTCTGAGGGGACATTGATGGAAGAGTTACTCAAATGCCCAATTTACCCTAAAGATTCCCTGACAAGAAAAAGATTTTTGCATCAGATACTCTCTGCTGTAGCATATTGCCATTCCCAGAATGTTATCCACAGAGATTTGAAACCAAAGAATCTGCTTATCGACTACCCTAACAAGATAATCAAGCTGGCTGACTTCGGTTTGGCAAGAGAATTTGGAGATCCTGATATGTTATTTACTGAACAAGTAGCAACTTGGTGGTATAGGTCACCCGAAATGTTACGTAACGCCCGTCAATATTCATCTCCAGTTGATTTGTGGTCTGTTGGTTGTATATTCGGCGAGATGGTAATTGGGCAGTCTATATTCCGATCAACGAACTACAGGGATGAATTAGAGGCGATGTTCAGGTAA 504 0.4067 MPLFVTVLRIWTKSQQFVFSEIKKQSKQRRKSEGTLMEELLKCPIYPKDSLTRKRFLHQILSAVAYCHSQNVIHRDLKPKNLLIDYPNKIIKLADFGLAREFGDPDMLFTEQVATWWYRSPEMLRNARQYSSPVDLWSVGCIFGEMVIGQSIFRSTNYRDELEAMFR 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0821 167 FunFam Mitogen-activated protein kinase 34 167 - -
Glsi14g0821 167 Pfam Protein kinase domain 52 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0821 167 SUPERFAMILY Protein kinase-like (PK-like) 34 167 IPR011009 -
Glsi14g0821 167 ProSitePatterns Serine/Threonine protein kinases active-site signature. 72 84 IPR008271 GO:0004672|GO:0006468
Glsi14g0821 167 Gene3D Phosphorylase Kinase; domain 1 5 21 - -
Glsi14g0821 167 ProSiteProfiles Protein kinase domain profile. 1 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0821 167 PANTHER CELL DIVISION PROTEIN KINASE 39 165 - -
Glsi14g0821 167 Gene3D Transferase(Phosphotransferase) domain 1 22 167 - -
Glsi14g0821 167 SMART serkin_6 4 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0821 Glsi-ChrGlsi14 9511763 9516788 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0821 36 167 Core Cell Cycle Gene Families AT3G48750 50.758 8.16e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Glsi14g0821 Pkinase 1.6e-37 CL0016