Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0812 ATGCCGTCAACAGAATCTCATTCAAATAACTCTGATTCTTTGGTTTCTTTCGATGCCGATCCATGTTACCGAATTCTCCAAGTCTCTGTTCATGCTTTAGATATTGATATAATCGAAATTGACTGGCTGTTACGCATTGTAGAATGCAAAATTTGCGGTCGTAGGCCCAGACCAGCGTACGAGTTGAGGGGCTGGAACTACGAGGTTCTTAGCGAGATTGGAGCAGGCGGGTATGGCAAAGTTTACCGTTGTTGTAACATTAACACTGGCCAGATAGTGGCCATCAAGCGGGTTGTTCTTTTTGGTGTAAATGAAGCTGTTCCAGCCAACATAATAAGGGAAGTCTCACTTCTAAAAGAGTTAGACCATGTCAACATTGTCAGGTTGCTGGACGTAAAGAGCAGTGGAAAATGTGTGAATCTAGTCTTTGAGCATCTTGACTTTGATCTTGATCATTACATAACCAGCCCAATTTACCCTAAAGATTCCCTGACAAGAAAAAGATTTTTGCATCAGATACTCTCTGCTGTAGCATATTGCCATTCCCATAATATTATCCACAGAGATTTGAAACCAAAGAATCTGCTTATCGACTACCGTAACAAGATAATCAAGCTGGCTGACTTCGGTTTGGCAAGAGAATTTGGAGATCCTGATATGTCACCCGAAATGTTACTTAACGCCCGTCAATATTCATCTCCAGTTGATTTGTGGTCTGTTGGTTGTATATTCGGCGAAATGGTAATTGGGCGGTCTATATTCCGATCAACGAACTACAGGGATGAATTAGAGGCGATATTCAGACACGCACAACAGAAATGTGAAGGGGCAGAAGGGCACAGGTTCACGGCTGCATTGGGGTCTTTAACCAAGCCTCCTTCCCAGACTTGA 891 0.4287 MPSTESHSNNSDSLVSFDADPCYRILQVSVHALDIDIIEIDWLLRIVECKICGRRPRPAYELRGWNYEVLSEIGAGGYGKVYRCCNINTGQIVAIKRVVLFGVNEAVPANIIREVSLLKELDHVNIVRLLDVKSSGKCVNLVFEHLDFDLDHYITSPIYPKDSLTRKRFLHQILSAVAYCHSHNIIHRDLKPKNLLIDYRNKIIKLADFGLAREFGDPDMSPEMLLNARQYSSPVDLWSVGCIFGEMVIGRSIFRSTNYRDELEAIFRHAQQKCEGAEGHRFTAALGSLTKPPSQT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0812 296 Pfam Protein kinase domain 67 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0812 296 SUPERFAMILY Protein kinase-like (PK-like) 65 269 IPR011009 -
Glsi14g0812 296 Gene3D Phosphorylase Kinase; domain 1 65 146 - -
Glsi14g0812 296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Glsi14g0812 296 SMART serkin_6 67 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0812 296 FunFam Cyclin-dependent kinase 4 65 147 - -
Glsi14g0812 296 PANTHER CELL DIVISION PROTEIN KINASE 66 279 - -
Glsi14g0812 296 ProSiteProfiles Protein kinase domain profile. 67 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0812 296 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Glsi14g0812 296 Gene3D Transferase(Phosphotransferase) domain 1 161 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0812 Glsi-ChrGlsi14 9369177 9375090 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0812 66 268 Core Cell Cycle Gene Families AT3G48750 48.148 3.21e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Glsi14g0812 Pkinase 2.6e-52 CL0016