Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0810 ATGCAGAGGGAAGTCAGAAGTTTATTCAAAGTACGTGTGCGTACCTTCATGGACCTTACCATGACTATTAACCCATCAGGAGGAGCACACAAAAACCCAACTCCATCACACTTCTATCCACCATACTCTCTCTGGAGTCTCTTCCTTTTGTTTTCCTTCCTTCCTTCCTTCTTCCCAACTTTGTCAAAGTGGTACTTTGCTTGTTTCCACCTGCTTCTGAGGCTTGGGTGTTATGGCATTGGGAACAATTTGATGGAGATCATAAGTTGTTTTCATTCAGTCATGACTTGTTGTTTTCCTTTCTTATTTGGTAAAAAGGTAAATTCTTCAGTCATACGAGATCCAGACATTGATGAAGGCATTCAAGATGTTAGGATTTATACCTACAAAGAACTAAGAAACGCCACTGAGGATTTTAGTCCAGCCAACAAAATTGGGGAGGGCGGTTTTGGTTCTGTCTATAAGGGACGGCTAAAAGATGGAAAAATTGCTGCTATCAAAGTTCTTTCAGCTGAATCAAGACAAGGGGTGAAGGAATTCTTGACAGAGATTAATGTGATCTCAGAAGTAGAGCATGAAAATTTGGTTAAGTTATACGGCTGTTGCGTGGAAGGAAATCACAGAATATTAGTTTACAATTACCTTGAGAATAACAGCCTTGCACAAACTCTTCTAGGTGGAGGTCACAGTAATATCCACTTCAACTGGAAAACACGGTCTAAGATATGCATTGGGATTGCACGTGGGCTTGCTTTTCTTCATGAGGAAGTGAGACCACATATTGTTCATAGAGACATAAAAGCAAGCAATATTCTCCTAGACAAAAACCTTACACCAAAGATTTCAGATTTTGGGCTTGCGAAGCTTATCCCACCAAACATGACTCACGTCAGTACACGTGTAGCAGGAACAATAGGTTATTTGGCACCAGAGTATGCAATAAGGGGGCAGCTGACGCGGAAAGCAGACATTTACGGTTTTGGTGTTCTCCTTGTGGAGATTGTCAGTGGGAGATGTAATACAAATACACTATTACCAATAGGAGAACAGTATCTTATAGAAAGGACGTGGACACTTTATGAGCGAAGGGAATTGGTAGATCTGGTAGACATATCACTAAATGGGGAATTCGATGCTGAGGAGGCTTGTAAGTTTCTGAAGATTGGCCTTCTTTGCACTCAGGATGCTCCGCAACTCCGGCCATCCATGTCTTCTGTGGTCAAGATGCTCACTGGTGAAATGAATGTTGATAACAGAAAGATAACAAAACCAGGCTTGATTTCCGATTTTATGGACCTTAAAGTTGGAGCAAAGCCAAAAAGTGATATTGATATGAAGACTCCATCCTCATATAATGCATCCTCTGCCTCAGACAACCAGGATACTACCATGTCATCATCAGCTGCTTCAACTGCTGCAACTACAACTTTCAGTCCTCAGCATGATAATAACATCTGCTCCCTTTCTCTCGCTCTGCCATTTGTGTTTAGGGTTTCTATGGTTGCCGGGGTAGTACCGCCAAGTTTCTGGGCATCTGGGAAGGCCTTCGTGATGGAGGATATAGGGTTGTTCAAACAAGGTTGGGAATGGCTTCGGTCGCAGAAGGATACTTGCTGGCGTGTCCGAACTGCAGTGAGTTGTTGCAGAGAGAAAACTGCTATGTTTATCGAGCAGCATTGGCCGATGGTGTGCAGTGGGTGCTTCAGATTGGGGAGGTTACTGCGGCTATCATTGTTTTATTGGAAAGACTGTGTTGTAAGGGGCTTTCAGTCGTTCATCAAGTTGGGTTCAGCGATGCTTCTCCTTATAATGTGGTGTTGCTTTCTTAGTTTGACCTCGATGCATTGCTTGATCTATCTACTTGTTAGTATGGGCATTGCGGGAGCTGCTGTCCAATATTTGGGTTATACTCCTGGCATTTTTATTGTAGGGCTTTTTGCTATCCTTATTTTGTGGATGTATGCTAACTTCTGGATAACAGGAACATTGCTTATTGTTGGAGGTTATTTATTCTCTCTAAATCATGCACGCTTGGTGGTTCTAATTGCAACCATATATGCTCTATATTGTGTCAAAGTTCGAGTGGGATGGCTGGGTGTTTTTCTCTCTGTAAACCTTGCATTTTTCTCCAACGACATATTGAATTTCCTGCTCCATTGGTTTGATAATGTGATTGAAAACTCACATACTGAAGACCAACAATCAGAAACAGTTATGGGAGATGACTTTCCTGAAGAGTGTGAATATTCTATTCCGACTGATGAATCTGAAAATTTGCATTCATGTAAATCATCCAGTAAACCTGCTGTTACAACAGAAGTTGTTGATAACCAGAAAGAGTTTTCTGCTAGCAAAGTTGTTAGAATACAAGCAGATTCAGTTGATGAAATGAGAAGGATATTGAGTAGTCTGGATCATTATGAAGCACTTGGATTTCTCCGTCACAAGAAGGTTGATGCTGCAATTTTAAAAAAAGAATACCGGAAAAAGGCAATGCTTGTTCATCCTGACAAGAATATGGGCAGCCCGCTAGCAAGTGAGTCATTTAAGAAGCTTCAATCTGCATATGAGGTTCTTTCTGATTCTACAAAGAAGAGAGACTATGATGAGCAATTGAGGAAAGAGGAATCCATGGCTAAAAGAGTCTGCCAGGAATCCCATGGTGCTTCACGTCAGGATAATCCTGACTATCGTTCTGAAGAATCCAGGCGAATACAGTGCACCAAGTGTGGCAATTCACATATATGGGTATGCACTAATAGACGTAAGGCAACAGCTAGATGGTGTCAGGACTGCTGTCAGTATCATCAAGCCAAAGATGGAGATGGATGGGTTGAGTACAAAGGTTCTTTAGTTTTTAACAGGCCTCAAAAGATGGAGATTCCATGTGCCTTTGTTTGTGCGGAAAGCAAAATTTTTGATGTTTCAGAATGGGCCATTTGTCAGGGAATGGCTTGTAGACCGAACACCCATCGACCAAGCTTCCATGTGAACATGGTTGGCTTGGAGAAAAGCCCGCGTTGTAACTCAAGCAGATACTCATGGGATTTGAATGCTGAGATGATGATGGATGAAGATGAAGAGACATTTGATCTGTGGCTTCAGCAGGCCCTGGCCTCTGGTTTCTTTTGCGAGACCTCCAGACGCCGACGGAAGAGCTGGAGTCCATTCAAATTGCATCAAAAGAAAAGCAAGAAGCAGTGGCGAAGAACGTCGTGCTGA 3222 0.4233 MQREVRSLFKVRVRTFMDLTMTINPSGGAHKNPTPSHFYPPYSLWSLFLLFSFLPSFFPTLSKWYFACFHLLLRLGCYGIGNNLMEIISCFHSVMTCCFPFLFGKKVNSSVIRDPDIDEGIQDVRIYTYKELRNATEDFSPANKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEINVISEVEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLLGGGHSNIHFNWKTRSKICIGIARGLAFLHEEVRPHIVHRDIKASNILLDKNLTPKISDFGLAKLIPPNMTHVSTRVAGTIGYLAPEYAIRGQLTRKADIYGFGVLLVEIVSGRCNTNTLLPIGEQYLIERTWTLYERRELVDLVDISLNGEFDAEEACKFLKIGLLCTQDAPQLRPSMSSVVKMLTGEMNVDNRKITKPGLISDFMDLKVGAKPKSDIDMKTPSSYNASSASDNQDTTMSSSAASTAATTTFSPQHDNNICSLSLALPFVFRVSMVAGVVPPSFWASGKAFVMEDIGLFKQGWEWLRSQKDTCWRVRTAVSCCREKTAMFIEQHWPMVCSGCFRLGRLLRLSLFYWKDCVVRGFQSFIKLGSAMLLLIMWCCFLSLTSMHCLIYLLVSMGIAGAAVQYLGYTPGIFIVGLFAILILWMYANFWITGTLLIVGGYLFSLNHARLVVLIATIYALYCVKVRVGWLGVFLSVNLAFFSNDILNFLLHWFDNVIENSHTEDQQSETVMGDDFPEECEYSIPTDESENLHSCKSSSKPAVTTEVVDNQKEFSASKVVRIQADSVDEMRRILSSLDHYEALGFLRHKKVDAAILKKEYRKKAMLVHPDKNMGSPLASESFKKLQSAYEVLSDSTKKRDYDEQLRKEESMAKRVCQESHGASRQDNPDYRSEESRRIQCTKCGNSHIWVCTNRRKATARWCQDCCQYHQAKDGDGWVEYKGSLVFNRPQKMEIPCAFVCAESKIFDVSEWAICQGMACRPNTHRPSFHVNMVGLEKSPRCNSSRYSWDLNAEMMMDEDEETFDLWLQQALASGFFCETSRRRRKSWSPFKLHQKKSKKQWRRTSC 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0810 1073 SUPERFAMILY Chaperone J-domain 780 868 IPR036869 -
Glsi14g0810 1073 PANTHER OS03G0832900 PROTEIN 506 1068 - -
Glsi14g0810 1073 Gene3D Phosphorylase Kinase; domain 1 110 214 - -
Glsi14g0810 1073 Pfam Protein kinase domain 142 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0810 1073 MobiDBLite consensus disorder prediction 444 467 - -
Glsi14g0810 1073 MobiDBLite consensus disorder prediction 879 898 - -
Glsi14g0810 1073 SMART serkin_6 139 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0810 1073 CDD STKc_IRAK 145 412 - -
Glsi14g0810 1073 Gene3D Transferase(Phosphotransferase) domain 1 215 424 - -
Glsi14g0810 1073 Pfam Cleavage inducing molecular chaperone 901 998 IPR032843 -
Glsi14g0810 1073 ProSitePatterns Nt-dnaJ domain signature. 849 868 IPR018253 -
Glsi14g0810 1073 Gene3D DnaJ domain 792 893 IPR036869 -
Glsi14g0810 1073 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Glsi14g0810 1073 ProSitePatterns Protein kinases ATP-binding region signature. 145 167 IPR017441 GO:0005524
Glsi14g0810 1073 FunFam cold-responsive protein kinase 1 112 214 - -
Glsi14g0810 1073 SUPERFAMILY Protein kinase-like (PK-like) 118 410 IPR011009 -
Glsi14g0810 1073 Pfam DnaJ domain 805 869 IPR001623 -
Glsi14g0810 1073 SMART dnaj_3 804 864 IPR001623 -
Glsi14g0810 1073 FunFam cold-responsive protein kinase 1 215 426 - -
Glsi14g0810 1073 CDD DnaJ 805 861 IPR001623 -
Glsi14g0810 1073 ProSiteProfiles Protein kinase domain profile. 139 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0810 1073 MobiDBLite consensus disorder prediction 445 467 - -
Glsi14g0810 1073 ProSiteProfiles dnaJ domain profile. 805 872 IPR001623 -
Glsi14g0810 1073 PRINTS DnaJ domain signature 844 864 IPR001623 -
Glsi14g0810 1073 PRINTS DnaJ domain signature 827 842 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0810 Glsi-ChrGlsi14 9341224 9354815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0810 518 1072 Miscellaneous Gene Families AT1G16680 70.483 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g0810 Pkinase 3.9e-46 CL0016