Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0806 ATGAGCAACATAAGCATCGTAGAGGCAAAGTTGCCACCTGGGTTCAGGTTTCATCCCAGAGATGAAGAACTTGTATGTGATTACTTGATGAAGAAGGTCACGCACTGCGACTCGCATCTCATGATTGATGTTGATCTTAACAAGTGCGAACCATGGGACATTCCCGAAACAGCATGTGTAGGAGGGAAGGAGTGGTATTTCTACACACAGCGAGACCGCAAGTATGCCACCGGCCTGCGCACAAATCGTGCCACTACCTCAGGCTATTGGAAGGCCACTGGGAAGGACAGGCCTATCCTTCGCAAAGGCACCCTTGTTGGTATGAGGAAGACTTTGGTGTTCTATCAAGGAAGGGCACCTAAAGGGAGAAAGACTGAGTGGGTCATGCATGAGTTTCGCCTCGAAGGTCCCCTTGGCCCTCCTAAAATTTCTTCAACCAAGGAAGACTGGGTTTTGTGCAGGGTGTTCTACAAAAGCAGAGAAATTGCTGCCAAACAAAGCATGGGAAGCTCTTATGATGACACAGGCTCTTCAGCTCTTCCTGCATTAATGGACTCTTACATCAGTTTTGACCAAGCTCAAACCCTAGTAGATGAATATGAGCAAGTGCCCTGCTTCTCCATTTTCTCTCAGAACCAAGCAAACCCTATTTTCAACCACACAACCCCAATGGAGCCAAACTTACCTGCCAAGAATAATGCAACCACATATGGTGGAGGAGGAAATCCCTATTTGGGTTCTTGCTTAGACCCTAATTTCTCCTGTGACAAAAAGGTATTAACAGCTGTTCTGAGCCAGCTCACAAAGATGGAAAGAAACCAACACAATCCTATTAGCCTCAGAGGGTCACCAAGCCTAGGAGAAGGAAGTTCAGATAGTTACTTGTCTGAAGTGGGTATGCCCAACTTATGGAATAATTATTGA 924 0.4632 MSNISIVEAKLPPGFRFHPRDEELVCDYLMKKVTHCDSHLMIDVDLNKCEPWDIPETACVGGKEWYFYTQRDRKYATGLRTNRATTSGYWKATGKDRPILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRLEGPLGPPKISSTKEDWVLCRVFYKSREIAAKQSMGSSYDDTGSSALPALMDSYISFDQAQTLVDEYEQVPCFSIFSQNQANPIFNHTTPMEPNLPAKNNATTYGGGGNPYLGSCLDPNFSCDKKVLTAVLSQLTKMERNQHNPISLRGSPSLGEGSSDSYLSEVGMPNLWNNY 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0806 307 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Glsi14g0806 307 FunFam NAC domain-containing protein 100-like 20 162 - -
Glsi14g0806 307 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Glsi14g0806 307 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Glsi14g0806 307 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 212 - -
Glsi14g0806 307 SUPERFAMILY NAC domain 2 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0806 Glsi-ChrGlsi14 9312791 9316495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0806 2 305 NAC Transcription Factor Family AT1G56010 58.176 1.18e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi14g0806 NAM 9.3e-37 No_clan