Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0798 ATGAAATCGACCAGGGAGAAAGATAACAATCGAAGCATCAGTTTGCACGTACACAACCTCCGTCAGCGTCTTCTTCATGCGTTGAGCCTTGGCACCAGATGTTTTGATGAGAAGACAAACAAATGGAAGTGGCAGTGCGCAAACATTGAAGTACAGAAACAAGTACTACGGTCGATTGATGCGTTTCTTGATTCTATTTCTGGAGATGCACGTGCATCACATCATACTATTGCAAAGGAGTCTGTTGCTGATGTTTTGGGAGCATTATCGTGGATTCTTCAATGCAAAAGTATACCCGTATTATGCATGGCAGCAAATGTAGCAGTAAAGCTAGTTAGTGTTTTACCTAATTCAGTATTACAATCTTGTACATTAGATCTTGTCTATCCTCTGTCATCCTTGTTATCTTCACCCAAAATGGAAGTTGCAATACCCTGTACTACTGCTTTGAATTTGGTAATCTCTAATTTGAGTGCCACAAGTGAGAAGGCAGTTTGGGAGGTATTGAAAGATACGGAGTGTGTCTTTCATATTGTTGTCAGTATAAAAGATTTCACTGGAGGTACGATGAAAATTGAATATTTGGAAGAGATGACTTCACTTTTGAGCTCACTGTTGTTGCGGTGGCCTCCAACTCGATTTCCTGTATGGAATGACATTAAACAAACGAAGGCTTTAGTAGATGTGCATACGAGGACTGATAATTCTGTTAGGCTTGTAGTTTTGAAGTTGTACACATCTTTAGCTTTATGTGGTTCTGTGGCCCAAAAACTTATAGAGCTTGGAGAAGTATTTCTAAAAATGGTTGTGCAATCCATGGGAAAATCATACCCTCATGCTGTTAGAATAGAGGGCTTTAGGATTGCTCAATGTCTATTGAGATCCCAAGAGAATTGTTTGAAAGTGATGGATATGTGTGGTGAAGCTCTTGTTGATGCCATAATTTGTGGGATGGGGGAAACAGGGATACATTCTAGAAAATTTGGAAATACCCATAGTTCTATATTAGTGGAAGCATGTCAATTGGCTCTGGTAACTCGTTGGGCAGGCGAGCATCATTTTAGTTTTTGGAAGCAAAGAATTGATAAAGTCCTCCTTAATCTTCTGATACAAAATATTCAAATTCAATCATATGAAGATGTCCTGCCATTGGAAAAACAAATATCCTTAGTGAAGGAAGGTTTAAAAGATAATTATCATCTCGGTGTGAGGGGTTACGTGTGGGACATTCTTGGGTGGCTTGTAATACACTCTGGAGAAAATTTCAACCCTTGTACACATGGAACTGAGCTTCATATCAAGTTACTAATCACATGTGCATGCTTGACTTTTATGGATGTGATTCAAAAATGGTGCCGTATATTTCAAAGGGATGTTGATGATAATTTTCAAAGTGAACCAGCATCAAGGGCTGTTCTAATGATGATTTATTCTCCATGTAACCACATTTCATCCCAGGCCAGACTTATATTATCTGGTATACTAACAGAGAAAGGCATACCATGTTTGAAAAACCTCATACATACTCTAGATTATACATCATCCCTTGTAAGCTATGGGTCATTCGATAAACTTCAACTTGTTATTAACTTGATCGCCTTGACTTGTTTTTCAAGTTTACCGCAGCATCAAAGATGTATTATTGAAAGTATAGGAATAAATGCAATTTTTCTCATTGTAAAACGAAGCTTAAGCAATGATATCCATGCAGAAAGGCTCAGCTTTGCCCCTCATTTGCATACAACATTCCGGGAGAGATCTTGTTGCTGGACTGGTGCAGAAGATTGGGAAGGTTCCAATATTCTTTTGTTTTATGGTTTGTGGGGCTTAGCCGAAGTGGTTCATCAATGTGCCTCCTTACCCGATAATCCTCAGATATTTATTACTCAGTTAGAATATATTGAAGCTCAATTAGCTAGCAAACTGCAAGAAATCTGCAGTAGTACCTCTTTCAGTCCTGGATTGAGATGGTATGCTACTTATATTCTTAGTTATTTGGGATTTTATGGTTTCCCAAATGAACTGGCCAAAAGGATTGGGAAATCTCTTAATGAGGAAGAATATGCAGATATGCAACTCCTTGTGGCAAATGGTAATACATTGAGTGTTCATGGTGTTATTCTTGCTGTTAGATGTCCATCACTGCTGCCTCCCAAAGTCTTACCCATTAAAGAAGAAACAACCAGCAGTTTAACAGATAAACTTGTCAAAGAGACCATTAGAGAAGTTCGTTTATCTTCTCATGTTGATTACGAAGCATTGGTGAAGTTGTTGGAATATGCTTACTTGGGATGCTTACATGCTGGAGAAGAAACTGTAAAGAAGTTGAAAGTTCTCGCTAAGCGCTGCAACCTACAACCTCTCTTGCAAATGCTTTTTAGACAAAGTCCAAAGTGGGGCACATCATTCCCCGGCTCTGATCTTACTCCGTCTCTTGCTTCAGCTGGAAGTTGTTTTTCGGATGTTGTATTGGAAGCTAAAACAGATAAACTTGTTGGATGGACATGCTATGCTTGTTCTCACTCAATGCCACATTTGCATGTTCACAAAGTTGTGTTGCAGTCTGGCTGTGATTATTTGCAGGGTTTATTTCGTTCAGGAATGCAAGAGAGTCATTCACAAATCATAAAGGTTGCTATTAGTTGGGAAGCAATGGTTAAACTAGTGCACTGGTTCTATTCCAATGAGCTACCAAATCCTCCCTCTGGATGTTTGTGGGATAATATGGATGATGAAGAAAAGCTATCTAATTTGCAACAGTATGTGGAGCTTTATTGGCTTGCTGAATTCTGGATTTTGGAAAGTATTCAGGAAGCCTGCTGGAATATGATTATGTCTTGTCTTGATTCTGCTAAGCAGTTGTCCATTAAAATACTCCAAATGGCTGCCAACCTCTCTTTGTGGAAGCTAGCTGATGTTGCAGCACATCACATGGCTCCTTCATATAGTCAATTACGTGATTCTTGTGAACTTCAAGAATTAGACGATGATCTAGTTCACTTAATTTATTCTGCTTCTATTCAACTTACCCAAGATGGAGGAAATTGCTTTAGATGA 3057 0.3886 MKSTREKDNNRSISLHVHNLRQRLLHALSLGTRCFDEKTNKWKWQCANIEVQKQVLRSIDAFLDSISGDARASHHTIAKESVADVLGALSWILQCKSIPVLCMAANVAVKLVSVLPNSVLQSCTLDLVYPLSSLLSSPKMEVAIPCTTALNLVISNLSATSEKAVWEVLKDTECVFHIVVSIKDFTGGTMKIEYLEEMTSLLSSLLLRWPPTRFPVWNDIKQTKALVDVHTRTDNSVRLVVLKLYTSLALCGSVAQKLIELGEVFLKMVVQSMGKSYPHAVRIEGFRIAQCLLRSQENCLKVMDMCGEALVDAIICGMGETGIHSRKFGNTHSSILVEACQLALVTRWAGEHHFSFWKQRIDKVLLNLLIQNIQIQSYEDVLPLEKQISLVKEGLKDNYHLGVRGYVWDILGWLVIHSGENFNPCTHGTELHIKLLITCACLTFMDVIQKWCRIFQRDVDDNFQSEPASRAVLMMIYSPCNHISSQARLILSGILTEKGIPCLKNLIHTLDYTSSLVSYGSFDKLQLVINLIALTCFSSLPQHQRCIIESIGINAIFLIVKRSLSNDIHAERLSFAPHLHTTFRERSCCWTGAEDWEGSNILLFYGLWGLAEVVHQCASLPDNPQIFITQLEYIEAQLASKLQEICSSTSFSPGLRWYATYILSYLGFYGFPNELAKRIGKSLNEEEYADMQLLVANGNTLSVHGVILAVRCPSLLPPKVLPIKEETTSSLTDKLVKETIREVRLSSHVDYEALVKLLEYAYLGCLHAGEETVKKLKVLAKRCNLQPLLQMLFRQSPKWGTSFPGSDLTPSLASAGSCFSDVVLEAKTDKLVGWTCYACSHSMPHLHVHKVVLQSGCDYLQGLFRSGMQESHSQIIKVAISWEAMVKLVHWFYSNELPNPPSGCLWDNMDDEEKLSNLQQYVELYWLAEFWILESIQEACWNMIMSCLDSAKQLSIKILQMAANLSLWKLADVAAHHMAPSYSQLRDSCELQELDDDLVHLIYSASIQLTQDGGNCFR 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0798 1018 PANTHER OS06G0674800 PROTEIN 5 1012 IPR044953 -
Glsi14g0798 1018 SUPERFAMILY ARM repeat 75 494 IPR016024 -
Glsi14g0798 1018 ProSiteProfiles BTB domain profile. 820 901 IPR000210 GO:0005515
Glsi14g0798 1018 SMART BTB_4 689 800 IPR000210 GO:0005515
Glsi14g0798 1018 SMART BTB_4 820 948 IPR000210 GO:0005515
Glsi14g0798 1018 Pfam BTB/POZ domain 845 940 IPR000210 GO:0005515
Glsi14g0798 1018 Pfam BTB/POZ domain 681 790 IPR000210 GO:0005515
Glsi14g0798 1018 SUPERFAMILY POZ domain 669 792 IPR011333 -
Glsi14g0798 1018 Gene3D Potassium Channel Kv1.1; Chain A 671 795 IPR011333 -
Glsi14g0798 1018 Gene3D - 6 669 IPR011989 -
Glsi14g0798 1018 Gene3D Potassium Channel Kv1.1; Chain A 814 988 IPR011333 -
Glsi14g0798 1018 SUPERFAMILY POZ domain 845 945 IPR011333 -
Glsi14g0798 1018 CDD BTB_POZ_ZBTB_KLHL-like 819 897 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Glsi14g0798 BTB 1.3e-06 CL0033