Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0797 ATGATGGAGTTGGACAACTCCTTGGAAACATGGCTACATGAGCTTGAAATGGAGGACCCTAGTAATTTTTTCCCAGAATTCCACACCAAGAAAATGTCTTCTTCTTCATCTTCTTCAGGTGTTGATGAAATTCCTACAAAGCAGATCAGAGATACTGAATTAATTGAAGACCAGAAATTGTATCAATATTCTTATTCTGGGTTGCACCCGCCATATGATCATCAACCTTCCAGTAAACCTGAAACTTCCAGTCCTTTAGGTTTTACAACTACGAAATCCTTATCAAAGTCTAGAGAAATATTGACAACTTCTGAAGCTGGTCTTTCATTTTCTGACTTGGCTTCTGTGAATTGGATTGACTTTGATGCAGCCATGAATAATGGCCAGGAAGTGACACCCTCCTTACCCCTTCCTCCCCACATAGTGGTAGAGAGAAAGCGAAGAGAAGACCTCAACCAGAGGTATTTGACTCTTTCGAACGTGATTCCAGGCTTGAAGAAGAGGGACAAGGCTTCTATCCTAGGAGAAGCTGTGAAGTACATGAAAGATCTTCAAGAACGCATAAAGAGCCTTGAGGAGAAAAGCAAGAAGAAAGTGGTGGAATCAGTGGTCTTTGTGCCGAGATCCCCTGTTCAATTATTGTCTTATAATAATATTAATACTAATAATTATTCATACACCAGTTACTCTGAGTCTGACGACGACAACTTCAGCAACAACAATCCCAGGCTGCTGCCCGAAATTGAAGCAAAAGTGTTGGAAAGGAGTGTGCTTATTCGAGTTCACTGTGAGAATAACAAAGGCATTCTCCCAAGGTTGTTGTCTGTAATAGCAAAGCTTCACTTGATTGTAGTCACTACCAATGTTATTCCATTTGGGAATGATACTGACATCACTGTCATTGCTCAGTGGAAGATGGAAATGCAGATTGAAGCTTGGAATTTGCTTAACCTGAGGGATGAGCTAGTCTCCGGTGGGCATAAAGTTCCACTGTGTGATCTAATCGATCGTCTCTTGAGAAGTAAATATCAGAGCAAACTTCAATTTTCTTCATTTAAATTTCAAGAACTATATAATATGGCAGAATTGCAGGCCCAGACTCCATACTTTAAAGCATTACACAAGCTTGCATAG 1134 0.403 MMELDNSLETWLHELEMEDPSNFFPEFHTKKMSSSSSSSGVDEIPTKQIRDTELIEDQKLYQYSYSGLHPPYDHQPSSKPETSSPLGFTTTKSLSKSREILTTSEAGLSFSDLASVNWIDFDAAMNNGQEVTPSLPLPPHIVVERKRREDLNQRYLTLSNVIPGLKKRDKASILGEAVKYMKDLQERIKSLEEKSKKKVVESVVFVPRSPVQLLSYNNINTNNYSYTSYSESDDDNFSNNNPRLLPEIEAKVLERSVLIRVHCENNKGILPRLLSVIAKLHLIVVTTNVIPFGNDTDITVIAQWKMEMQIEAWNLLNLRDELVSGGHKVPLCDLIDRLLRSKYQSKLQFSSFKFQELYNMAELQAQTPYFKALHKLA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0797 377 MobiDBLite consensus disorder prediction 66 90 - -
Glsi14g0797 377 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 140 198 IPR036638 GO:0046983
Glsi14g0797 377 PANTHER BHLH TRANSCRIPTION FACTOR 30 315 - -
Glsi14g0797 377 Pfam Helix-loop-helix DNA-binding domain 140 185 IPR011598 GO:0046983
Glsi14g0797 377 Gene3D - 138 203 IPR036638 GO:0046983
Glsi14g0797 377 Coils Coil 174 201 - -
Glsi14g0797 377 SMART finulus 141 190 IPR011598 GO:0046983
Glsi14g0797 377 MobiDBLite consensus disorder prediction 27 45 - -
Glsi14g0797 377 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 135 184 IPR011598 GO:0046983
Glsi14g0797 377 MobiDBLite consensus disorder prediction 26 51 - -
Glsi14g0797 377 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0797 Glsi-ChrGlsi14 9248027 9251437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0797 140 303 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.122 2.12e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi14g0797 HLH 1e-10 No_clan