Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0793 ATGGCCATGCAGTTAGTGTTCTCATTCTGTCTGGTGATCCTGAAGCTCACTTCTTCAGCATTTGCAACCAGCACTTTGAACGAAGGCTATGGTGATGGTGACACTGGCTGTCCATTAAGGACTGACATATACCAAAACACTTGCCCAGAAGCAGAGGCCATTATCTTCTCTTGGGTGCAGAAGGCAGTCTATGAGGACTCAAGAATGGCAGCCTCACTGCTTCGTCTACATTTCCATGATTGCTTTGGGTGTACTGCTTCGGTGCTGCTGGATGACACGGAAGGCTTTGTTGGTGAGAAAACTGCAGCTCCAAACTTGAACTCACTCAGAGGTTTTGAAGTGATCGATGCAATCAAATCTGAACTAGAATTGGTCTGCCCAGAAACAGTCTCTTGTGCTGACATTCTAGCAACTGTTGCTCGAGATTCTGTTGTTCTGTCAGGGGGTCCAAGTTGGGAAGTCCAAATGGGAAGGAGAGACAGCTTGACTGCCAGCAAGGAAGCGGCAAATAACAATATCCCAGGACCAAATTCAACTGTTGATGTGCTCGTGTCCAAGTTCCAGAACGTAGGCCTCACACTGAAAGACATGGTTGCCCTCTCTGGTGCGCACACAATAGGAAAAGCTCGCTGCACAACATTCAGCTCTCGTTTCCAAGGCAGCAGCAGCAGCAACTCAGGTATCATCCCAGATGTTAATGTGGACTTCATTTCGTCTCTGCAGCAATTATGCTCGGGAGTTGATAGCAGCAACACAGTGACACATCTTGACCTGGTCACACCAGCAACCTTTGATAACCAGTACTACGTTAATCTGCTTTCTGGGGAGGGGTTGCTTCCGTCGGACCAGGTCCTTGTTAATGGAAACAATGATCGGACAAAACAGATTGTGGTCACCTATGCAGAAGATCCCTTTGCTTTCTTTGAGGACTTTAAGTATTCTATGTTGAAAATGGGAAGCTTGCTGGGTTCAAGTGATAATGGCGAGATTCGTAGGAACTGCCGAACTTATTCCCTCTTATTGATTCACTCCTCTCACTAG 1041 0.4697 MAMQLVFSFCLVILKLTSSAFATSTLNEGYGDGDTGCPLRTDIYQNTCPEAEAIIFSWVQKAVYEDSRMAASLLRLHFHDCFGCTASVLLDDTEGFVGEKTAAPNLNSLRGFEVIDAIKSELELVCPETVSCADILATVARDSVVLSGGPSWEVQMGRRDSLTASKEAANNNIPGPNSTVDVLVSKFQNVGLTLKDMVALSGAHTIGKARCTTFSSRFQGSSSSNSGIIPDVNVDFISSLQQLCSGVDSSNTVTHLDLVTPATFDNQYYVNLLSGEGLLPSDQVLVNGNNDRTKQIVVTYAEDPFAFFEDFKYSMLKMGSLLGSSDNGEIRRNCRTYSLLLIHSSH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0793 346 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Glsi14g0793 346 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 PRINTS Plant peroxidase signature 313 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 Pfam Peroxidase 59 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 ProSiteProfiles Plant heme peroxidase family profile. 38 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Glsi14g0793 346 FunFam Peroxidase 174 318 - -
Glsi14g0793 346 PANTHER PEROXIDASE 72-RELATED 39 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 Gene3D - 44 335 - -
Glsi14g0793 346 CDD secretory_peroxidase 39 335 IPR033905 GO:0004601|GO:0042744
Glsi14g0793 346 Gene3D Peroxidase, domain 2 174 318 - -
Glsi14g0793 346 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 SUPERFAMILY Heme-dependent peroxidases 39 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi14g0793 346 FunFam Peroxidase 42 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0793 Glsi-ChrGlsi14 9205042 9207361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0793 43 335 Peroxidase AT4G16270 67.458 1.39e-141 403