Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0788 ATGGTGAAGTTCCTGAGGCCCAACAAGGCCGTGATCGTCTTGCAGGGTAGATTCGCCGGTCGCAAGGCTGTCATTGTTCGCAACTTCGACGACGGTACCCGCGACCGACCCTACGGCCACTGCCTCGTCGCTGGCATTTCCAAGTACCCCCAGAAGGTCATCCGCAAGGACTCCGCCAAAAAGACTGCCAAGAAGTCCCGCGTCAAGGCCTTCATCAAGGTGGTTAACTACAGCCACTTGATGCCCACTAGGTACACTCTGGATGTGGATCTCAAGGACATCGTCACCCCCGATGCCCTCCAATCTCGGGACAAGAAGGTTGCGACTTCGAAGGAGATCAAGAAGAGGTTCGAGGAGAGGTTTAAGACTGGGAAGAACAGATGGTTCTTTTCTAAGCTCAGGTAG 405 0.5457 MVKFLRPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPQKVIRKDSAKKTAKKSRVKAFIKVVNYSHLMPTRYTLDVDLKDIVTPDALQSRDKKVATSKEIKKRFEERFKTGKNRWFFSKLR 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0788 134 Pfam Ribosomal L27e protein family 52 134 IPR001141 GO:0003735|GO:0005840|GO:0006412
Glsi14g0788 134 SUPERFAMILY Translation proteins SH3-like domain 3 134 IPR008991 -
Glsi14g0788 134 CDD KOW_RPL27 6 88 IPR041991 -
Glsi14g0788 134 FunFam 60S ribosomal protein L27 1 134 - -
Glsi14g0788 134 Gene3D - 1 134 IPR038655 -
Glsi14g0788 134 PANTHER 60S RIBOSOMAL PROTEIN L27 1 134 IPR001141 GO:0003735|GO:0005840|GO:0006412
Glsi14g0788 134 SMART kow_9 4 31 IPR005824 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0788 Glsi-ChrGlsi14 9186258 9187103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0788 1 134 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 77.612 2.33e-76 221