Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0775 ATGGGTAGCGAAGATTTCAGCAAGGATGACTATAATATTATGGATGATGAAGAAGTTCCACTGCCAGGGTTTCGCTTCCATCCCACAGATGAAGAACTTGTGGGCTTCTATCTTCGTAGGCAGCTCGACAAGAAGCCCATCAGGATCGAACTCATCAAACAGATTGATATTTACAAATACGACCCATGGGATCTTCCAAAAGCGAGTAGTACTGGAGGAGAGAAGGAGTGGTACTTCTTTTGCAGAAGAGGGAGGAAGTACAGGAATAGCATAAGGCCAAACAGAGTGACTGGGTCTGGATTCTGGAAAGCAACTGGCATAGACAAGCCTGTGTTCTCACTCGTCGGAGAAGGCAATGACTGCATTGGGCTCAAGAAAACCCTTGTTTATTATCGTGGCAGTGCAGGCAAAGGCACCAAAACTGACTGGATGATGCACGAGTTTCGCCTTCCCTCCATTCATGACACTATTCCCACCAACCTTTCCAAAGCCAAGCCCAAGACTGATACCACCGTTGCCCAAGAAGCTGAAATTTGGACATTGTGTAGAATTTTCAAGAGAAATGTGTCACCAAGGAAGTGCACACAAGACTGGAGACTAGTCAGTGCTGTTAAGCGTCATTCCATGGACAAGAGCACAAGAATAAGTAGTAGTAGTATTGGGGAGTCTGATACTGACAAAGAATCTTACATCAATTTCGGAGCAAGCAATGGCCATTATTATAATTATCACAAAGAGGAGAAACCAGTCATTAACTACACAAGCTTTAATGATCAAAAGAATCAATTTCATCATGTCGGTCATCAGATGAGCTCCCCAGTGGCACAACCTCAACTAACTGCACCTTCTTCCAACTTCCGGATTAACCCTTCTGCTTCAGGCAACGACTTCTTGACGTTTGATAATTGGGATGAGCTTGGATCAGTTGTGAAGTTTGCTCTTGATTCACCACTCATGTAA 960 0.4417 MGSEDFSKDDYNIMDDEEVPLPGFRFHPTDEELVGFYLRRQLDKKPIRIELIKQIDIYKYDPWDLPKASSTGGEKEWYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKPVFSLVGEGNDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSIHDTIPTNLSKAKPKTDTTVAQEAEIWTLCRIFKRNVSPRKCTQDWRLVSAVKRHSMDKSTRISSSSIGESDTDKESYINFGASNGHYYNYHKEEKPVINYTSFNDQKNQFHHVGHQMSSPVAQPQLTAPSSNFRINPSASGNDFLTFDNWDELGSVVKFALDSPLM 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0775 319 ProSiteProfiles NAC domain profile. 20 187 IPR003441 GO:0003677|GO:0006355
Glsi14g0775 319 SUPERFAMILY NAC domain 13 187 IPR036093 GO:0003677|GO:0006355
Glsi14g0775 319 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 257 - -
Glsi14g0775 319 Gene3D NAC domain 29 190 IPR036093 GO:0003677|GO:0006355
Glsi14g0775 319 FunFam NAC domain-containing protein 35 29 190 - -
Glsi14g0775 319 Pfam No apical meristem (NAM) protein 22 150 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0775 Glsi-ChrGlsi14 9063055 9065213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0775 13 198 NAC Transcription Factor Family AT5G39820 55.610 3.75e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi14g0775 NAM 1.2e-35 No_clan