Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0773 ATGAAGGAGGGTGGTAGATCCAAACAAGGTGCAATGTCGCCATGTGCAGCATGCAAGCTTCTGCGAAGGAGATGTGCCCAGGATTGTGTGTTTGCTCCTTATTTTCCTGCAGATGAACCCCAGAAGTTTGCTAGTGTTCATAAGGTTTTTGGGGCTAGCAATGTCAACAAAATGTTACAGGAACTACCAGAGCACCAGCGCAGTGATGCAGTGAGTTCCATGGTATATGAAGCCAATGCAAGGGTCAGGGACCCTGTGTATGGGTGTGTGGGAGCCATATCTTCTCTGCAGCAACAAGTGGATGTGCTTCAAACCCAATTGGCACTAGCACAGGCAGAGGTTGTTCAAATGAGAATGAGCCAATTCCCATCCACATCATCAGTACCTGCAGGTTCAAATTCGTCATCGGAGAACTTGTCACCATCAAGCAGGCTCATTTCTTCTCAGACCAAGTCCCTTTTTGCCATGGACATGGGAGAGTCCTTGTGGTCATGCTAG 498 0.4819 MKEGGRSKQGAMSPCAACKLLRRRCAQDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVVQMRMSQFPSTSSVPAGSNSSSENLSPSSRLISSQTKSLFAMDMGESLWSC 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0773 165 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Glsi14g0773 165 Coils Coil 93 113 - -
Glsi14g0773 165 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 137 - -
Glsi14g0773 165 MobiDBLite consensus disorder prediction 124 144 - -
Glsi14g0773 165 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0773 Glsi-ChrGlsi14 9041046 9043702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0773 1 165 AS2 family AT1G31320 71.676 1.03e-69 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi14g0773 LOB 1e-43 No_clan