LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi14g0772	ATGGCTTCCGCTCCTCAATTCTACTCAAACTACACATATTTCCCTTCTGATTTCACAGACCTCCCCACCCAACCCTATGCCAGTTCCTCGGCTATAGAGAATGCAATTTGGGGTCAATATAACTTCGTTCCTTCGCTTGATAATTTTGGTGTGTCCATGGATTGTGATACCATGCCTTCTTCTTGGATGCCAACTTTTTCCGAACAGATGGTGGGCATTTCAGACTTGACCGTGCCTGAAATTTCAGAGTTCAATACGAGCTTCTATGGTGGCGGAACTAATGGGGGGTTTCAGAGTTTCAGCGGCGGATACCAACCACATATTGGTGAGTTTGGGGAAGAGTGTTGTGGGATAGTGGAGGATGTGAAGCCACTGGCTTGTCCTAACACTGCCAGAGAAAACTGGGTATGGTTAATTGTGATAACTCTTTCTTGTGTTCCATTCAAGGGAATTCAAGGTAATCAAATGGGAGCAGTTGAAGAAAATATAAAGGTAGGAAGATACTCAGAAGAAGAAAGAAAGGAAAGAATTCTACGATATTTGAGGAAAAGAAATCAAAGGAACTTTAACAAAACCATAAAGTATGCTTGTCGGAAAACCCTAGCTGATCGGAGAGTCAGAGTAAGGGGAAGATTTGCTAGAAACAATGAGCTATGTGAGGGTGAAATGACAATGAAAAAGATTGAGATTCCTCAACAAGATCAGGACTTGTATGGTGGTGATTCTATCCAGTTCCAGTTAAAGAATGATGAGGAGGACTGGCTGCAAGAGGCTATGGAAAGTTTGGCGTTTTTCACTCATTCTTCGCCCGATGATGTATAG	822	0.4258	MASAPQFYSNYTYFPSDFTDLPTQPYASSSAIENAIWGQYNFVPSLDNFGVSMDCDTMPSSWMPTFSEQMVGISDLTVPEISEFNTSFYGGGTNGGFQSFSGGYQPHIGEFGEECCGIVEDVKPLACPNTARENWVWLIVITLSCVPFKGIQGNQMGAVEENIKVGRYSEEERKERILRYLRKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEGEMTMKKIEIPQQDQDLYGGDSIQFQLKNDEEDWLQEAMESLAFFTHSSPDDV	273

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi14g0772	273	ProSiteProfiles	CCT domain profile.	173	215	IPR010402	GO:0005515
	Glsi14g0772	273	PANTHER	ZINC FINGER PROTEIN CONSTANS-LIKE 4	96	232	IPR045281	GO:0009909
	Glsi14g0772	273	Pfam	CCT motif	173	215	IPR010402	GO:0005515

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi14g0772	Glsi-ChrGlsi14	9031781	9033703	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi14g0772	169	217	C2C2-CO-like Transcription Factor Family	AT5G57660	51.020	8.10e-10	57.0

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Glsi14g0772		CCT	2.3e-16	CL0281

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