Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0746 ATGGGGAAAGGAAGATCCCCATGCTGTGACAAGAATAAAGTGAAGAGAGGGCCTTGGAATCCTGAAGAAGACATTAAGCTCATCACTTTCATCCAGAAACATGGCCATGATAACTGGCGTTCTCTCCCCAGACAAGCAGGCAGGACAGACAATGAGATAAAGAATGTGTGGAACACCCACTTAAAGAAGAGATTCAAGAAAAGTTCAGAGTCCAATACTACTGCAGATGAATTATCCATAACCAGCTCCTCCTCGTCATCTTCACCAAATAATACATCCAAGGTTGTCGGTGATGATGGATTCAATGAACAAGGACCCCAAGTGACAATAATGGCAGTGAAAACTGATCAGCAAAATTCCAAATCAACCCATGTGTCCGATGAACTTAACAATAGCATGATCATCCCAGAAAACCCAAAAGAGTCGTCACCTTCATTTTCTTCCATAGATTCAACCATCTCAAACCTAGCCCAGATTGTTAATAAACCAGAAGAACTTATGAGTTCTGATCCATTCACCTTCCTAGGACCTTATGATACATTAAACGAGGTTGATAAGCCAAACAGCAGTACACTGCAGCTTGAGATACCATTTGAGTCAGACTATGATTTCTGGAACATGTTAGATAACATAGGATCGTTACAGCAGTCAAATGAAGTGCAGGTGGACGACGCCACCGCCCAAACCTTAAATCATGGACACAAGAAAGTTGAAGATGCTGAAACGAGGAAGTGGCTGCATGACTTGGAGAAAGAGCTTGGATTAGGCGAAACCGAGGAGGAGAAAAACCAGTTGGAAGATCATCAGTACTTCCTGCCAAAGAATGATGATGCAGCTGAGGCAGGAATAATGGACCCACAGAAGACATTGGATTTTGAGATGATGACAAACCCAGGACCTGACCAAGAGATGGCTTATTTTCAACTATTCTCAGTGTAG 939 0.4271 MGKGRSPCCDKNKVKRGPWNPEEDIKLITFIQKHGHDNWRSLPRQAGRTDNEIKNVWNTHLKKRFKKSSESNTTADELSITSSSSSSSPNNTSKVVGDDGFNEQGPQVTIMAVKTDQQNSKSTHVSDELNNSMIIPENPKESSPSFSSIDSTISNLAQIVNKPEELMSSDPFTFLGPYDTLNEVDKPNSSTLQLEIPFESDYDFWNMLDNIGSLQQSNEVQVDDATAQTLNHGHKKVEDAETRKWLHDLEKELGLGETEEEKNQLEDHQYFLPKNDDAAEAGIMDPQKTLDFEMMTNPGPDQEMAYFQLFSV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0746 312 MobiDBLite consensus disorder prediction 1 21 - -
Glsi14g0746 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 65 IPR017930 -
Glsi14g0746 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 47 - -
Glsi14g0746 312 Gene3D - 13 67 - -
Glsi14g0746 312 SMART sant 15 63 IPR001005 -
Glsi14g0746 312 SUPERFAMILY Homeodomain-like 10 69 IPR009057 -
Glsi14g0746 312 CDD SANT 18 61 IPR001005 -
Glsi14g0746 312 MobiDBLite consensus disorder prediction 65 104 - -
Glsi14g0746 312 Pfam Myb-like DNA-binding domain 16 61 IPR001005 -
Glsi14g0746 312 MobiDBLite consensus disorder prediction 72 98 - -
Glsi14g0746 312 ProSiteProfiles Myb-like domain profile. 11 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0746 Glsi-ChrGlsi14 8310223 8312577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0746 1 65 MYB Transcription Factor Family AT1G56160 47.458 4.40e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi14g0746 Myb_DNA-binding 1.3e-10 CL0123