Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0743 ATGTATGGAGTGGGTTGGATGGTGCGTAGAAGTCCCGGCCCCACCAGAGCTGCCACGTATGCCCGCTTTATCTTCTCATCCACGATTTCTTCACTCTCACATGCCACCTCCTCCTATCATATTCATACCATAGCCGAAGCAGACGCAGAAGGCAGAAGCGGTGCGAGGGTGTCCCCAATGGCCTCTGCGACCCTCTTGTCCTCAAACCCTAGGGTTTTCTCTGCTAATTCCTCCGCTTTTGTTGTGCCCAGCTCCGATCATGCCCTCTCTCAAACTCCAACCATTCCCAAATCCTTCAGCGGCCTTTGCAAGCCCTTCCATTCTCGAGTTCCCACATCGATTCGTAGACGAGGCTTCTTCGTCAAGGCTGCGGTTATAAAGTGGCGATGTCCAAAGCAAATTCTCCCTCCCAACTGTGACACTGAGTTCCAAAAAAAAATCTTGTATCTAGAATCCATTGGTATTGACTCTTTCTCACTTACTGAAAATCATCCAATGCTTATCTCTGCCTCCCTTGCTGATATAAAATCCACTGTGGAATTCATGACCTCCATGGATTTCTCTGCAATTGAGTTTCGGCGGATTGTTGGCATGTGCCCTGAGGTTCTCACCTCCAGAGTCTCAGATCTCATGCCTGTCTTCACCTTCCTTCTCCGTGAGGCTCATGTGAATGGCTCAGATATCAAGCGCGTCATAAATCGTCGTCCCAGGTTGCTGGTCTGCAGTGTTACTGAGCAACTTCGTCCCACCCTATACTTCCTTCAAAGTATCGGCATCGAAGAGGTAAACAGGCACACTTATTTGCTATCATGTAGTGTTGAAGAAAAGCTTATACTCAGAATTGATTACTTTGAGAATATTGGCTTCTCTCGTCGTGATTCAACTGCAATGTTTCGAAGATTTCCTCAGCTGTTCTGTTATAGTATTAAGAACAATTTGGAGCCCAAATACAATTACTTTGTGGTGGAAATGGGAAGAGATTTGAAGGAGTTGAAAGAATTTCCACAGTATTTCTCATTTAGCTTAGAGAATAGAATCAAACCTAGGCATAAACGCTGTGTAGAAATGGGGGTGTGTTTTCCTCTCCCTGTATTGTTAAGGACAAATGAAATGCAATTTCGTAATAGATTAGATCTATGTGTAAATTCTTCAACACCCTTGAAAACATCTCCTCTATGGTGTGCTAATTGTTATATTGATCAAATATAG 1209 0.4442 MYGVGWMVRRSPGPTRAATYARFIFSSTISSLSHATSSYHIHTIAEADAEGRSGARVSPMASATLLSSNPRVFSANSSAFVVPSSDHALSQTPTIPKSFSGLCKPFHSRVPTSIRRRGFFVKAAVIKWRCPKQILPPNCDTEFQKKILYLESIGIDSFSLTENHPMLISASLADIKSTVEFMTSMDFSAIEFRRIVGMCPEVLTSRVSDLMPVFTFLLREAHVNGSDIKRVINRRPRLLVCSVTEQLRPTLYFLQSIGIEEVNRHTYLLSCSVEEKLILRIDYFENIGFSRRDSTAMFRRFPQLFCYSIKNNLEPKYNYFVVEMGRDLKELKEFPQYFSFSLENRIKPRHKRCVEMGVCFPLPVLLRTNEMQFRNRLDLCVNSSTPLKTSPLWCANCYIDQI 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0743 402 SMART mt_12 229 260 IPR003690 GO:0003690|GO:0006355
Glsi14g0743 402 SMART mt_12 193 224 IPR003690 GO:0003690|GO:0006355
Glsi14g0743 402 SMART mt_12 328 359 IPR003690 GO:0003690|GO:0006355
Glsi14g0743 402 SMART mt_12 158 188 IPR003690 GO:0003690|GO:0006355
Glsi14g0743 402 SMART mt_12 261 290 IPR003690 GO:0003690|GO:0006355
Glsi14g0743 402 SMART mt_12 295 327 IPR003690 GO:0003690|GO:0006355
Glsi14g0743 402 Gene3D Transcription termination factor 3, mitochondrial 205 380 IPR038538 -
Glsi14g0743 402 PANTHER CGI-12 PROTEIN-RELATED 158 377 IPR003690 GO:0003690|GO:0006355
Glsi14g0743 402 FunFam Transcription termination factor MTEF1, chloroplastic 217 381 - -
Glsi14g0743 402 Pfam mTERF 218 373 IPR003690 GO:0003690|GO:0006355
Glsi14g0743 402 Pfam mTERF 128 221 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0743 Glsi-ChrGlsi14 8297851 8300169 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi14g0743 mTERF 9.5e-32 No_clan