Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0739 ATGGCAGTCATGGTTACCTTGCCTATTTTGGCATGGCTGTGTTTTTGGAGAACTACTTTTGGTGCTGTAAGAGACAGTTTGAAGCCAGGTGATGTGCTCAATCACCCAAGTGTCCTACTCTCTGCAAACCACAAGTTCAGTCTGAAATTTGACACAGTTGGATCTGATTTCACCCACACTTACTTGGTTATAGCTCACACAGGCACTTCCATCGCTTACAAGGATTGGATTGCCAACCGAAACAACCCTATTACCAACAATTCTGGGACTCTAACTTTGGGATACTCTGGGGATCTGACAATTACCCGTCAAAATGGGAAGCCTATAACCCTGTATTCTCCTGTCCAACCTACCAACAATACGATTGTCACCCTAATAGATTCTGGAAACTTGGTCCTGCAAGAATTGCACCCCAATGGTTCTACCAAGCGTGTGTTGTGGCAGAGTTTTGATCACCCTTCAGATATACTGCTTCCCTATATGAAGTTAGGAGTTAATCACAAAACTGGACAGTTTTGGTCTCTCAGGGCATCCGTTTCTGATGCTGACCCAACTTCTGGTTCCTTTACACTTGAATGGGAACCAAGAAGAAGCCAATTAATCATAAAGAGGCGAGGGCAGATATATTGGACAAGTGGAGGGAATGATTTTGACATTGCTAGAGCTGATACTTGTTATGGTTACAACACTGAGGGTGGTTGTCAAAGATGGGAACAACCCAAGTGTAGGCAACCCGGTAAAATATTCACCATTAGGTCCGGATATTTTGATCATCCATTGGAGGGTGGTGATTCTGTCCCAGACAGCAACATCAGTCTTCATGAAAGTGATTGTAAGGCTACTTGCTGGACCAACTGTACCTGTATTGGGTTCACAACTTATTTCCCCAATGGGACTGGATGTCACTATTACCATGGGCCTTGGAAGATATCAAATTTTATCTCTCGTGATGCAAGCATTAACATTCTAGACCGAATTCATTCAGATCATAAAGATTTGAAGAAGTGGATAATAACTGGTTCTGCCATGGCAGCAGCTCTAATCATACTCTGCCTTGGCATTTTCTGCCTAATACTGAGAAGGAAAAAATCTGCAGTTCAAGAGGATAAGAGAAGCAGAGACGAGAATGAACTCCTCGACTTTAAGTCTTTGGATAGATATACCACTGTTAATGAACTCCAAAATGAAGTAAAAAAGGGAAATGATTTAAAAGTATTCAGCTATGCATCAATCATGGAAGCAACAAACGGGTTCTCACCAGAAAACATTGGTTACATGTCACCTGAATATGCCATGGAAGGAATTTTCTCAATCAAATCAGATGTTTATAGTTTTGGAGTTTTACTACTTGAAATTATTGGTGGTAGAAGAAACAACAGCTTCTACAAAGCCCAAGGCCAACTAAATCTAATAGGACAGGCTTGGGAACTATGGAATGAAGGTCTGGGACTTGAATTAGTAGATCCAAATTTAAGAGATTCATGCATTGAAGATCAAGTATTAAGGTGCATTCATGTTGGACTTCTATGCGTGGAAGAAAGTGCAGTTCATCGTCCAACCATGTCAGACATTCTAACCATGTTGACAAGTGAAAATGGATCACTTCCTTTGCCTAGAAGGCCAGCGTTTTACAGTGGAAGAAAACCCAATGAGGGATACAAATATCCTCTTGATTCAGAATATTGTTCAATGAAACTATCCATTTCAAACACAAGTGCAAGATAA 1725 0.4099 MAVMVTLPILAWLCFWRTTFGAVRDSLKPGDVLNHPSVLLSANHKFSLKFDTVGSDFTHTYLVIAHTGTSIAYKDWIANRNNPITNNSGTLTLGYSGDLTITRQNGKPITLYSPVQPTNNTIVTLIDSGNLVLQELHPNGSTKRVLWQSFDHPSDILLPYMKLGVNHKTGQFWSLRASVSDADPTSGSFTLEWEPRRSQLIIKRRGQIYWTSGGNDFDIARADTCYGYNTEGGCQRWEQPKCRQPGKIFTIRSGYFDHPLEGGDSVPDSNISLHESDCKATCWTNCTCIGFTTYFPNGTGCHYYHGPWKISNFISRDASINILDRIHSDHKDLKKWIITGSAMAAALIILCLGIFCLILRRKKSAVQEDKRSRDENELLDFKSLDRYTTVNELQNEVKKGNDLKVFSYASIMEATNGFSPENIGYMSPEYAMEGIFSIKSDVYSFGVLLLEIIGGRRNNSFYKAQGQLNLIGQAWELWNEGLGLELVDPNLRDSCIEDQVLRCIHVGLLCVEESAVHRPTMSDILTMLTSENGSLPLPRRPAFYSGRKPNEGYKYPLDSEYCSMKLSISNTSAR 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0739 574 Gene3D Transferase(Phosphotransferase) domain 1 392 534 - -
Glsi14g0739 574 SUPERFAMILY Protein kinase-like (PK-like) 423 553 IPR011009 -
Glsi14g0739 574 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 406 533 - -
Glsi14g0739 574 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 178 IPR036426 -
Glsi14g0739 574 SMART blect_4 30 153 IPR001480 -
Glsi14g0739 574 Gene3D - 19 151 IPR036426 -
Glsi14g0739 574 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 424 519 - -
Glsi14g0739 574 Pfam Protein tyrosine and serine/threonine kinase 421 525 IPR001245 GO:0004672|GO:0006468
Glsi14g0739 574 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Glsi14g0739 574 Pfam D-mannose binding lectin 76 176 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0739 Glsi-ChrGlsi14 8265172 8268756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0739 424 569 Receptor kinase-like Gene Family AT4G23150 52.055 4.13e-43 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g0739 PK_Tyr_Ser-Thr 1.3e-07 CL0016