Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0734 ATGTTTATGATCACTAAACTGGCGATTTTCTTGCTCGTTTTGGGGAACTTGGGGTTGAGGATAACAGAACAAAGTGACCATTTGAAGGCAGGTGATATGTTAAATGACTCAAACCCCAGTCTATGCTCTGCAGGGGATGTTTATTGCTTGTCTTTTGCCACATCAAACGACCCCACTTACTTATCAATATACAACAGAGGAACAGAGGCGACTGTTTGGAATGCCCCCCGGACTGAACCTCTTCTCAACCAATCCTCCGCGGCTTTAAGTTTGGACCATTTTGGTGCGTTGAAGATGACGGACCAAGGTGGGGAACCAATAATCCTATATCCTCCTTCTTCAGCTCAGCCTCAGCCTGTCGACACTGTGGCCACCTTGTTGGACACAGGCAATTTTGTTCTGGAAGAGCTTCACCCAAATGGAGATTATTGGGCAAGTGGAGAACTGATAAACGGGATGTTCAAGGACATATCAAAGGAAGTCCAACGCTTTTATAACTACACCATCATCTCAAACCAAGATGAAGAGTATTTCACATTTGCAACAACTCGGAAAGATGAGGATGCAAGATGGACATTATCTTATGATGGGCTGATAACTGATAGCAGAGGGAACGAGATTGCAAATGCTGGCAAGTGTTATGGATATAATGACGATGGAGGATGCCAATTACGGGACCAGCCACCTTGCAGGCATGTAGGTGAGATGTTTGACGAAATGGATGTTACAGTAAGAGATCAAGGTATCACCTACGACGTTGATGGAAATGAGGGTTTGGGCTTAAGTGATTGCAAGGCTACCTGCTGGAGCAACTGCGGCTGTGTGGGATTCACCAGTTACCATGATAATGAAGCCGGATGTGTCTTTTATTATGAGAACTCGCGGAAGAATGTTCCAGAAGGCCCTGTTTTAACCATTAGTTTGCTTGTTAATAGAACTCTAAACACAGTCCGAGCCCGCGCCCGAGCCCGCGCCTATGATCATGCCCGTGCCAAGTCCAGGTTCCGAATCAAATGCAAGTACAAAGAAGATCAAATGGCTTATTGCCATCAGTATTACCACTCTATTCATAATCTGTGCACCAATTCTATGGCTACTACTAAAGAGAAGGAAACTCATGCTCGAAGTGGATACATGCCCCCTGAATATGCAATGGAAGGAGTTTTCTCTATAAAGTCAGATGTCTATAGTTTTGGAATCCTAATGTTAGAGATTGTGAGTGGTAGAAGAAACAACAGCTTTTACGGTGACAACTACCCACTTAATTTAGTGGGACATGCTTGGGAGCTTTGGAAACAAGGTGCAGCACTAGCATTGGTAGATCCAGCAATGAAAGATTCAATTGTCCAAGATCAAGTGTTGAGATGCATTCATGTTGGCCTATTATGTGCAGAAGAACGTGCAGTTGATAGACCCACCATGACGGACATTTCATCGATGTTGGCAAATGAAAGTGCAAAGCTTCCTTTGCTTAAGAGACCTGCATTTTGCTTTCTAGATCGTGCTAATGAAGCCAATGAATCTCTTGTACAACCTAAGATTGATTCATCAAATGGCTTGTCCATATCTGATTTATCAGCAAGATAG 1587 0.4367 MFMITKLAIFLLVLGNLGLRITEQSDHLKAGDMLNDSNPSLCSAGDVYCLSFATSNDPTYLSIYNRGTEATVWNAPRTEPLLNQSSAALSLDHFGALKMTDQGGEPIILYPPSSAQPQPVDTVATLLDTGNFVLEELHPNGDYWASGELINGMFKDISKEVQRFYNYTIISNQDEEYFTFATTRKDEDARWTLSYDGLITDSRGNEIANAGKCYGYNDDGGCQLRDQPPCRHVGEMFDEMDVTVRDQGITYDVDGNEGLGLSDCKATCWSNCGCVGFTSYHDNEAGCVFYYENSRKNVPEGPVLTISLLVNRTLNTVRARARARAYDHARAKSRFRIKCKYKEDQMAYCHQYYHSIHNLCTNSMATTKEKETHARSGYMPPEYAMEGVFSIKSDVYSFGILMLEIVSGRRNNSFYGDNYPLNLVGHAWELWKQGAALALVDPAMKDSIVQDQVLRCIHVGLLCAEERAVDRPTMTDISSMLANESAKLPLLKRPAFCFLDRANEANESLVQPKIDSSNGLSISDLSAR 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0734 528 SMART blect_4 32 150 IPR001480 -
Glsi14g0734 528 Gene3D Transferase(Phosphotransferase) domain 1 344 489 - -
Glsi14g0734 528 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 363 527 - -
Glsi14g0734 528 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Glsi14g0734 528 Pfam PAN-like domain 230 291 IPR003609 -
Glsi14g0734 528 SUPERFAMILY Protein kinase-like (PK-like) 376 498 IPR011009 -
Glsi14g0734 528 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 151 IPR036426 -
Glsi14g0734 528 Pfam Protein tyrosine and serine/threonine kinase 363 478 IPR001245 GO:0004672|GO:0006468
Glsi14g0734 528 Gene3D - 20 148 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0734 Glsi-ChrGlsi14 8212327 8217620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0734 377 503 Receptor kinase-like Gene Family AT4G11480 54.688 4.85e-40 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g0734 PK_Tyr_Ser-Thr 4.6e-09 CL0016