Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0730 ATGGCGTCTTCTCTCCTATCAAAGATGTTGTTGGGTCCTCGCCTGATTCAGTCTTCGACATTTCTCACTCACAAGCCGCAAATTCTCACTTCTTTCTTCAATAGGAGGTCATTTTATTTACGAGCTGTCCCAGCCTATACAGCACAAAAAGCAAAACCAAATAATTGGGCTCCTTGTGTCATGGCTTCTTCTGTAATTGGGACAAGAGCTGCTTATTCAACAAAGTCTGTATCTACAAATGAGCCTGTTGTTTCTGTGGATTGGCTCTATGCTAATCTGAAGGAGCCTGATATTAAGGTGCTGGATGCCTCCTGGTACATGCCAGATGAGCAGAGGAACCCAATTCAAGAATATCAGGTTGCTCACATTCCGGGGGCCCTTTTCTTTGATGTAGATGGAATAGCAGATCGAACTACAAATCTGCCACACATGTTGCCATCAGAAGAAGCTTTTGCCGCTGCTGTTTCTGCTCTTGGCATAGAGAACAAAGATGGGCTGGTGGTTTACGATGGAAAAGGAATATTTAGTGCAGCTCGTGTCTGGTGGATGTTCCGAGTGTTTGGGCATGACAGAGTTTGGGTATTAGATGGTGGTCTGCCAAGGTGGCGTGCATCAGGATATGATGTTGAATCTAGTGCTTCTGGTGATGCTATATTGAAGGCTAGCGCTGCAAGTGAGGCAATAGAGAAAGTATATCAGGGACAAACAGTTGGCCCTATCACATTTCAGACTAAATTTCAGCCACATCTTATTTGGACCCTCGAGCAGGTCAAGACAAATGTTGAGGAAAAAAGTCATCAACACATTGATGCTCGATCAAAGCCCAGGTTTGATGGAGCAGCACCTGAGCCCCGGAAGGGAATCAGAAGTGGTCATGTACCTGGCAGCAAGTGCATTCCTTTTGCCCAGTTGTTGGATGCTTCACAAACATTATTACCAGCAGATGAGCTTAAGAAGAGATTTGATCAAGAAGGCATCTCTTTGGAAAGCCCAGCTGTGACTTCATGTGGCACTGGGGTGACTGCTTGCATTCTTGCATTGGGTCTCCATCGTCTTGGAAAGTCTGATGTTGCAGTCTATGATGGATCTTGGACCGAATGGGGAGCACAATCCGATACACCTGTTGAAACTTCATAA 1137 0.4538 MASSLLSKMLLGPRLIQSSTFLTHKPQILTSFFNRRSFYLRAVPAYTAQKAKPNNWAPCVMASSVIGTRAAYSTKSVSTNEPVVSVDWLYANLKEPDIKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGIADRTTNLPHMLPSEEAFAAAVSALGIENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQTVGPITFQTKFQPHLIWTLEQVKTNVEEKSHQHIDARSKPRFDGAAPEPRKGIRSGHVPGSKCIPFAQLLDASQTLLPADELKKRFDQEGISLESPAVTSCGTGVTACILALGLHRLGKSDVAVYDGSWTEWGAQSDTPVETS 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0730 378 Gene3D - 75 217 IPR036873 -
Glsi14g0730 378 ProSitePatterns Rhodanese C-terminal signature. 357 367 IPR001307 GO:0004792
Glsi14g0730 378 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 81 212 IPR036873 -
Glsi14g0730 378 FunFam Sulfurtransferase 247 378 - -
Glsi14g0730 378 Pfam Rhodanese-like domain 254 369 IPR001763 -
Glsi14g0730 378 Pfam Rhodanese-like domain 85 204 IPR001763 -
Glsi14g0730 378 ProSiteProfiles Rhodanese domain profile. 94 211 IPR001763 -
Glsi14g0730 378 Gene3D - 248 376 IPR036873 -
Glsi14g0730 378 ProSitePatterns Rhodanese signature 1. 118 129 IPR001307 GO:0004792
Glsi14g0730 378 ProSiteProfiles Rhodanese domain profile. 262 376 IPR001763 -
Glsi14g0730 378 CDD TST_Repeat_1 83 206 - -
Glsi14g0730 378 FunFam Sulfurtransferase 76 218 - -
Glsi14g0730 378 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 255 377 IPR036873 -
Glsi14g0730 378 MobiDBLite consensus disorder prediction 265 289 - -
Glsi14g0730 378 SMART rhod_4 252 373 IPR001763 -
Glsi14g0730 378 SMART rhod_4 84 208 IPR001763 -
Glsi14g0730 378 CDD TST_Repeat_2 253 369 - -
Glsi14g0730 378 PANTHER THIOSULFATE SULFERTANSFERASE 78 377 IPR045078 GO:0016783
Glsi14g0730 378 MobiDBLite consensus disorder prediction 265 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0730 Glsi-ChrGlsi14 8191874 8200098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0730 61 377 Sulfurtransferasese or Rhodanese AT1G79230 80.757 0.0 558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0730 14 8191874 8200098 Glsi14g0730 14 8191874 8200098 ECH