Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0729 ATGTACTTCAACTGGGACAGTTCTACCCTTCAAACTATGAACAACCCAGAAATGATGAGCAGTAACTTCCACGAAGCAGTACCAGAACTATCACCAGACTACCTTGCTTATTGTTCAGATAATGAAAGTTTCTTCTTCCCAAATACCTTCTTCGATTCCGACCCAGAATTAATCTACCCTCATGATCTCCTTTCCTCCACTTCTGCTTCTCCATACCATGACCCTGCTTTAACATCACTCTCTGACATTTTCCCACTAACTGAAGATGATGATCACAATAACGACCTCCTTCTTCCCTACCCAAAACGCCAAAAGCACTCCTTCGAAACCCATCAAGTCCAAGACCAGTACTACTACCCTGTGCTGGATAATTATAATTTCCTTGATGGGTTTGTGCCCAATCATCAATATTATCCACCGTGTTCATCATTACTGTCACTTCCACTTCCACTTCCATTTCCTCTAGTGGGTGATAATAGCGGCGATGGTGACAATTATGAGAAGAAAAGTAGTGGTAGTGGTAGCGAGAAGACGAGGGCGGTGTCGGCGCAGAGCATTGCGGCTAGAGAAAGGAGGAGGAAGATCACAGAGAAAACGCAGGAGCTAGGGAAGCTGGTTCCTGGTGGGTCTAAGATGAACACAGCCGACATGCTTCATGCAGCTTCCAACTATGTCAAGTTCTTGCAAGCCCAACGTGGAATGCTTCAACTCATGAACTCACTCCAGGAGGAAGATAAGGGATCAACTCCAAGTGAAGATCTGCAGTTACTTCTTGCGTCTACCTCTGTACAAGAGAAGCTGTATTTGGAAGACAAGTGCTTTGTTCCCACAGATTTAGTCACCACTTTGACAAATCATATTGAACTCCAATCAAGACCTTCCATTCTTCAAGATCTTAATCAGTTCATCATTGGGACAGACACTGAGAAGAAACCGCTGCAACAATAA 948 0.442 MYFNWDSSTLQTMNNPEMMSSNFHEAVPELSPDYLAYCSDNESFFFPNTFFDSDPELIYPHDLLSSTSASPYHDPALTSLSDIFPLTEDDDHNNDLLLPYPKRQKHSFETHQVQDQYYYPVLDNYNFLDGFVPNHQYYPPCSSLLSLPLPLPFPLVGDNSGDGDNYEKKSSGSGSEKTRAVSAQSIAARERRRKITEKTQELGKLVPGGSKMNTADMLHAASNYVKFLQAQRGMLQLMNSLQEEDKGSTPSEDLQLLLASTSVQEKLYLEDKCFVPTDLVTTLTNHIELQSRPSILQDLNQFIIGTDTEKKPLQQ 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0729 315 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 228 IPR011598 GO:0046983
Glsi14g0729 315 Gene3D - 176 248 IPR036638 GO:0046983
Glsi14g0729 315 MobiDBLite consensus disorder prediction 160 191 - -
Glsi14g0729 315 CDD bHLH_AtbHLH_like 184 236 IPR045239 -
Glsi14g0729 315 Pfam Helix-loop-helix DNA-binding domain 184 229 IPR011598 GO:0046983
Glsi14g0729 315 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 183 277 IPR045843 GO:0003700|GO:0006355
Glsi14g0729 315 SMART finulus 185 234 IPR011598 GO:0046983
Glsi14g0729 315 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 177 240 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0729 Glsi-ChrGlsi14 8188505 8190839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0729 50 303 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G34820 37.453 1.97e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi14g0729 HLH 9.8e-06 No_clan