Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0726 ATGATCAGGGGTAGTTTAGGGTTTTGGCTGATGCCTCCTCGTTTGGACAAAATGCAGAAATCTATTTTTGGCACACAACGAGAACGGGGCTGCCAGCCTGCTACTGGCAAAGGGGCTATGAGCTGGAACAATGAGGAAGAAAAAGATTGTTCTTTTATCAGTCTCTTAATAAATTCTTCTCCAAAGGGATTATCAAGCATCTGCAAACAGATTCAATGCAATAACATGGAACCTAGATATGAGGAATTCCAGCCTGCATCACAGTCAGTAATGCAGGACCATCTGGATGGCATGCATAGTGCTAGGAGACCATCTGACCCAAATTTATCAGAAGTTAAACCTGTACGTAATTACTCCATACAGACCGGTGAGGAATTTGCTCTTGAATTTATGCTAGATAGGGTGAATCCCAGGAAGCCTGTATTTTCAAATGCTGGTGATCCCAATTATACAACAGATTATCTGAATCTGAAAGGTATTTTAGGCGTGAGTCATGGAGGATCTGAAAGTGGATCAGATATTTCTATGCTCTCAATGGTTGACAGGGGTCCAAAAGAGTTTGACGGAAACACTTTATTACATGGAGGCAGATGTAATTATGGATCAATTCAATCAATGCCAAAAACTTCATATACTCAAGACAATGGTCGATTCATGCATGGGTATGCCTCTTTTGGAGGCTCTGATAGCTCATCAATAACGATGAAAGTTCTTTGCAGCTTTGGGGGAAGAATATTACCGCGACCTAGTGATGGAAAGCTAAGGTATGTTGGAGGTGAAACACGCATTATCCGCGTAAGAAAGGACATATCTTGGCAGGAGCTTATGCAGAAAACATTGTTAATATACAATCAGGTTCATGTACTTAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTATCTGTGTCATCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCATCTAGAAGACAGAGAAGGATCACAAAAGCTTAGGATTTTTTTGTTCTCAATGTGTGATTTGGAGGATGCTCAGTTTGGTCTCGGCAGCATGAGTGATGATGCTGAGGTCCAGTATGTTGTTGCTGTTAATGGAATGGACTTGGGTTCAAGAAACAACTCAACACTTCTTGGTGTGAACTCATCAGCTAATGATATACATGAATTGGACCGGCAAAATATTGAGGAGGCTAGTAGAGTTGCTGTAGAATCTGTAGGTGTCAGTAATGCTCCCTTGACTGACAAATTTGACTCATTATTGACTATTCAGTCTTCACAACCAATGCCTCCAAGTTCTTCAAATGCTTATGAAACCAATCCACTGATTTATAGTGACCAGATGATGCACCTTGGAGAAACTACTAGTCAATATCCTATTCACCATGGCCTTAATCCTTCTAAAAAATCTGCTCTCATAGAGACCCCTAATACTATACCTCCTCCCGAGCTGATAAACCGACAAGGAATTTTGAATGAAGGTCATCCACCTAATGGATTACAAGTACAGAATTTAGAAATACCAGCAATGCAGGTGAAAACCATGGGTGATAGTTCAGTTCCACAAGGAAATAACCCTGGGAAAATTTTATTCTTGGAAACACCATCCTGTGTTTCCTCACAGGCAAAAGATGGTTTGTTGAAAAATTATTTTCCTGAAACATCATTTGCAGTTACCAGACCAGAGGAGCATCTACCTTCATTGCCATCAATGAAAAAGGAGCAGCGCCAGGAATGTGAAGAGGCCTCTTCTACATCTAGCAGTGCATTTGGTCCGGCTTATGTTGATTCTCATTCCAATGGGATTGCTTTGAGTTGTCTTCACCCTCCTCCAATTCCTAAAAGAGTGTACTATTCAGAAAGAACTCCCAGGGAGCAAGTAGAGTTGCAGAATCGGTCCTCAAAGTCAGATGATACGTATGATTCTCAGTTTCTTGTATCAAATTTACTTTCTGATATCAGCCCACAGTATTCAGTTACAGAATCTGGTGACAACTTGCATGACAGAAATCTGTCTAATCCAACCAAGGAATCCTGCACTACAGCAAAACACTTGCATGCAGATGGTCACATCATTGATAATGGGTTTGCCAAACTACAGATGTACAAACTGTTGCCTGAGGCAAGCAGTCAGATAAAGTCAAAGCTATCAGAACATGTGGATCCAGAATTGAAGCAGGTATTACCAAACAATGAAGGAAGTAAAGATGTGGTAAATGAGGATCAGATTATTGGGTTGGAGACTGAAATTTATTGTAAAGGTGACCATAGCAAGTCCCTGCAAGATGAAAATGAAGACTGTAAACCAGATCTTCCTGCAATTGACAAGGTTCCCCCTTTTAAGCATCATGACGATCCAGCATCCCATCTTCCAGAGATCAATTGGGGTGATGCCTCAGGGAAGGAATCCAGTGATGATTGTATGGTACAAGAACTACCTGTTTCTTTCACTGGGAACACAACCAAAGACGTTCCTCTAGGTTTCCCCTCAAATGCTGTTTTCAAACAAGCACACGGTGACATTCTAATTGATATTGATGATCGATTTCCCCGTGAATTGCTTTCTGATATGTATACTAAAGCAATAATTGCAGAAGATCCTTCTAGTCTACATCCACTAGCTAATGGTGGAGTGGGCTTAAGCATAAATATGGAAAATCATGAACCTAAACCATGGTCATATTTTCAGAAACTGGCACAAGAAGGGCTTGATAACATGTCTTTTATTGACCAGGATCATCATGGTTTTTCACCTGCATCAGGAAAAGCAGTAGATAATAGAACTCACCATGTTGCACCTCTAACAACTGATGGAGTTTCTGTAGACCATGCAGATTCCCACCTCAATTTTGATGAAGAAAATCAAAAGGATTCACATGGAAAGATTGGAACAGAAAACACTATTCTGCAGTCAAATTGTGATCATTCCCAAGTGAAGGAGACTGATAGTATGCAGTTTTATGCTATGATGGAAAACTTAAGGGCACAAGAGTCAGAGTATGAGGATGGGAAGTTTGAAACGAGAAACAGTTGTCTACCTCCTCTTGATCCTTCTCTGGGAGATTTTGATATTAGCACCGTGCAGGTCATAAAGAATGAAGATCTTGAAGAGCTGAGGGAACTGGGTTCTGGTACCTTTGGAACTGTGTATCATGGAAAATGGCGAGGAACAGATGTTGCCATTAAAAGAATAAAGAAAACCTGTTTCACTTGTCGATCATCTGAACAAGAGAGATTGACTGTTGAGTTCTGGCGGGAAGCTGACATACTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGTGTGGTCCAGGATGGACCAGGAGGAACAATGGCCACTGTTACAGAGTACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCCATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAATATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACTTGAAAGATCCTTTAAGGCCTATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAAAGAAATACCTTGGTTTCTGGTGGTGTGCGGGGTACTCTACCTTGGATGGCACCAGAGCTGCTGAATGGCAGCAGCAACAAGGTCTCGGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAGATTCTAACTGGTGAGGAGCCTTATGCCAATATGCACTATGGTGCAATTATAGGTGGGATTGTAAATAACACATTAAGGCCAACAATTCCAAGTCATTGTGACCCTGAATGGAGAACACTGATGGAGCAATGTTGGGCACCTAATCCTGCAGCCAGGCCCTCCTTCACAGAAATTGCCGGTTGCTTGCGGGTAATGTCTGCAGCTGCTAGCCAAACCAAAGCACAGGTCCATAAAGCAACTAAATGA 3945 0.4132 MIRGSLGFWLMPPRLDKMQKSIFGTQRERGCQPATGKGAMSWNNEEEKDCSFISLLINSSPKGLSSICKQIQCNNMEPRYEEFQPASQSVMQDHLDGMHSARRPSDPNLSEVKPVRNYSIQTGEEFALEFMLDRVNPRKPVFSNAGDPNYTTDYLNLKGILGVSHGGSESGSDISMLSMVDRGPKEFDGNTLLHGGRCNYGSIQSMPKTSYTQDNGRFMHGYASFGGSDSSSITMKVLCSFGGRILPRPSDGKLRYVGGETRIIRVRKDISWQELMQKTLLIYNQVHVLKYQLPGEDLDALVSVSSDEDLQNMMEECNHLEDREGSQKLRIFLFSMCDLEDAQFGLGSMSDDAEVQYVVAVNGMDLGSRNNSTLLGVNSSANDIHELDRQNIEEASRVAVESVGVSNAPLTDKFDSLLTIQSSQPMPPSSSNAYETNPLIYSDQMMHLGETTSQYPIHHGLNPSKKSALIETPNTIPPPELINRQGILNEGHPPNGLQVQNLEIPAMQVKTMGDSSVPQGNNPGKILFLETPSCVSSQAKDGLLKNYFPETSFAVTRPEEHLPSLPSMKKEQRQECEEASSTSSSAFGPAYVDSHSNGIALSCLHPPPIPKRVYYSERTPREQVELQNRSSKSDDTYDSQFLVSNLLSDISPQYSVTESGDNLHDRNLSNPTKESCTTAKHLHADGHIIDNGFAKLQMYKLLPEASSQIKSKLSEHVDPELKQVLPNNEGSKDVVNEDQIIGLETEIYCKGDHSKSLQDENEDCKPDLPAIDKVPPFKHHDDPASHLPEINWGDASGKESSDDCMVQELPVSFTGNTTKDVPLGFPSNAVFKQAHGDILIDIDDRFPRELLSDMYTKAIIAEDPSSLHPLANGGVGLSINMENHEPKPWSYFQKLAQEGLDNMSFIDQDHHGFSPASGKAVDNRTHHVAPLTTDGVSVDHADSHLNFDEENQKDSHGKIGTENTILQSNCDHSQVKETDSMQFYAMMENLRAQESEYEDGKFETRNSCLPPLDPSLGDFDISTVQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKTCFTCRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSHCDPEWRTLMEQCWAPNPAARPSFTEIAGCLRVMSAAASQTKAQVHKATK 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0726 1314 PANTHER SERINE-THREONINE PROTEIN KINASE 279 1295 - -
Glsi14g0726 1314 SUPERFAMILY CAD & PB1 domains 250 336 - -
Glsi14g0726 1314 ProSiteProfiles Protein kinase domain profile. 1032 1298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0726 1314 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1025 1119 - -
Glsi14g0726 1314 MobiDBLite consensus disorder prediction 555 589 - -
Glsi14g0726 1314 Pfam Protein tyrosine and serine/threonine kinase 1033 1294 IPR001245 GO:0004672|GO:0006468
Glsi14g0726 1314 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1120 1312 - -
Glsi14g0726 1314 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 254 336 - -
Glsi14g0726 1314 ProSitePatterns Protein kinases ATP-binding region signature. 1038 1063 IPR017441 GO:0005524
Glsi14g0726 1314 PRINTS Tyrosine kinase catalytic domain signature 1114 1127 IPR001245 GO:0004672|GO:0006468
Glsi14g0726 1314 PRINTS Tyrosine kinase catalytic domain signature 1222 1244 IPR001245 GO:0004672|GO:0006468
Glsi14g0726 1314 PRINTS Tyrosine kinase catalytic domain signature 1151 1169 IPR001245 GO:0004672|GO:0006468
Glsi14g0726 1314 PRINTS Tyrosine kinase catalytic domain signature 1266 1288 IPR001245 GO:0004672|GO:0006468
Glsi14g0726 1314 SUPERFAMILY Protein kinase-like (PK-like) 1022 1293 IPR011009 -
Glsi14g0726 1314 Gene3D Transferase(Phosphotransferase) domain 1 1120 1314 - -
Glsi14g0726 1314 CDD STKc_MAP3K-like 1038 1291 - -
Glsi14g0726 1314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1157 1169 IPR008271 GO:0004672|GO:0006468
Glsi14g0726 1314 MobiDBLite consensus disorder prediction 563 577 - -
Glsi14g0726 1314 SMART serkin_6 1032 1298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0726 1314 SMART PB1_new 249 336 IPR000270 GO:0005515
Glsi14g0726 1314 CDD PB1_UP2 238 334 - -
Glsi14g0726 1314 Gene3D Phosphorylase Kinase; domain 1 1025 1119 - -
Glsi14g0726 1314 Gene3D - 253 336 - -
Glsi14g0726 1314 Pfam PB1 domain 251 334 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0726 Glsi-ChrGlsi14 8164562 8173068 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0726 107 691 MAP Kinase Kinase Kinase AT1G16270 40.216 7.22e-95 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Glsi14g0726 PK_Tyr_Ser-Thr 8.1e-63 CL0016