Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0725 ATGGAACAACCAAGAAGGCAGAAACAACATCAGTACAATGCCATGGAACCCAGAAATGAGGAATTCCATCCTGCACCACATTCAGTCATGCAGGACCATATGGATGGCATGCATATTAATACAAGACCTTCTGACCATAAAATATCAGAAAAAAAACCTGTACTTAATTACTCCATACAGACTGGTGAGGAATTTGCTCTAGAATTTATGCGAGATAGGGTGAATCTCATGAAACCTGTGTTTCCAAATATCATGGATGATCCCAATTATGCAACAGGTTATATGGAACTGAAAGGAATTTTAGGCATTAGTCATACAGGATCTGAAAGTGGGCCAGATATTTCTATGCTCCCAAAAGTTGAAAAAGGTCCAAAAGAATTTGACAGAAGGAGCTCTTCTTTGCACCGGGATAGAAGCAATTATGGTTCAGTTCGGTCAATACCTAGAACTTCATCTAATCAAGACAATAATCGAGTCCTTCATGGCGTTGCCTCTTCTGGAGCTTCTGATAGCTCATCAATGAAGATGAAGGTTCTTTGCAGCTTTGGTGGTAGAATATTACCACGTCCCAGCGATGGAAAGCTTAGATACGTTGGGGGTGAAACACGTATTATTAGTATCAGAAAAGACATTCGTTGGCAGGAGCTTATGCAGAAAACCTCATCAATCTATAGTGAGACATATGTAATAAAGTATCAGCTCCCTGGAGAAGATCTTGATGCATTGGTTTCAGTGTCTTCTGATGAGGATCTTCGGAATATGATGGAGGAATGCCATGATCTAGTAAACAGAGAAGGATCACAAAAGCTTAGGATGTTCCTGTTTTCCATGAATGATTTGGATGATACTAGCACTGATGGTGATACTGAAATTCAATATGTAGTTGCTGTTAATGGCATGGACTTGGGATCAAGGAACCACTCAATCCTTCATGGTACAAGAACTTCTGAAGATAATATACATGAATTGGATGGACAAAATATTGAGAGGGAGGCCAGAAGAGCTATGATAGAATCAACTGGTGTCCCCAGTTCTTCCTTGACTACCAATGCTAACTCATCATTGGGAATTCAGTCTTCACAACCAATGTTACCAACTTCCTCAAATGCTTATGAAAGATATCCATTGTTTTATAGCAACCAACATCAGGAAACCAGTCAATATCCAGTGCACCATGGCTTTGATCCTTCTAACAACTCAGCTCTTGGACAGATGCCGGTTTCTGTGCCTACTCATGGTCTTATCAATCAAGGAATAATTAATGAAGGCCTTCCACCTAGTGAGTTTCAAGTACAAAATTCAGAAATGTCAGCAATGCAGGTAAAGAAAAGGGTTAATAGTCCTATTAAGCATGAAAGTGATCCTAGAAAAGGCTTCTCCTTGGAAACTCCTTATCCCGTTCCTTCGCAGCCATTTGATGGCAATTTACAAGGTAATGTTTCTGAAGCATCAGTAACAGTTGCTGTGTCAGGGGGGCATCTACCTAAATTGCCTTCAAAAAGCAAGGGCAAGCAGCAGCATTATGAAGAGGCCTCCTCATTGGTAAATACAATGAATTCCACACATGTTCCAAAATCTGGTGAAGATGACCCTTATTCAACCTCTACTAGTGCATTATGTCCTCCTTATGTTGATGTTGAGTCCAATGTGATTGATTTGAGTTGCCTTGAACCACCTCCACTTCCCAACAGAGTCTATTATTCAGAGAGAATTCCCAGGGAGCAGGCAGATTTGCTGAACCGATCTGCAAAGTCAGATGATGCACATGGCTCTCAGTTACTTATGTCAGAATTACTTTCTGACTTCAACCAGCAGAATTCAGATACAAAATCCAATGATAAATTGCACATTGGAGATCTGACTTCAGTGTCAAGTATGACAGCAAAACCATTACATGCTAATGGTGAAACCATTGACGATGGGCTTGCTCAGCTACCAAATTACAAACAGTTGCCTGATGCAACTTCAAAGCAATTACAGCATGTGGACTCTGAGTTGAAACCAGTATTAGCAAAAAATGAAGAAAATAAAGTTGCTGCAAATGGGGATTGGGTCCTTAGGTCTGAAAATGAAACCAATGACTCCAAAGATAACCATAACAGTGATGAAACCAATGGCACTGAACATCCTGCATTTCGCCAGATTCCTTCTGTTGAGCACGATGAGAAGCCAGCATCTACTCTTCCAGACCTTAATGCGAGCGAGGCTTCTACTAGGGAATTCAGTAATGATGCTAGGGTTCAACCACAGGTTTTTCAAGATTTTCCCTCAGATGCTGTTTCAATGCCAGCTCAGGGTGATATTCTGATTGATATTGATGACAGGTTTCCTCGTGATTTCCTTTATGATATGTTCTCCAAGGCAATCCTTTCTGAAGATTCCTCATATATTGGTCCATTACCAACAGATAGAACGGGGTTAAGCTTAAACATGGAAAATCATGAGCCCAAACGTTGGTCATTTTTTCACAAGTTGGCACATGAGGGGTTTGACAATGTGTCTCTAATTGATCAGGATCATCTTGTTTTTTCATCTGCATTAGGAAAAGTACAAGGAGATAGTAGATCTCAGCAAGTTGCACCTATACTGGCTGATGGAGTTTCAGTAGGCCATCCTGAACCTGACCTCAATTATGGTGAAGAAAATAAAAAAAACTTACCTGTAACAACTAGAACAGAGACCACTGTTTTGCACCCAAACTATGATCATACCCAAGTTAAGAAGACTGAAAACCAGAACTTGGATCCTGTAGTGGAAAACATAAGACCAAAAGAGTCTGAGTATGAGGATGGCAAGCATGAATTGAGGAATATTGGTCACCCACAAGATCCTTCATTGGGGGATTTTGACATCAGTACTTTGCAGCTCATAAATAATGAAGATCTTGAAGAGCTGAAAGAATTGGGTTCAGGTACCTTTGGGACTGTGTACCATGGTAAATGGCGGGGAACAGATGTTGCCATTAAAAGAATAAAGAAAAGCTGCTTCACTGGTCGATCTTCAGAACAGGAGAGACTGACTGAAGAGTTCTGGCGGGAAGCTGACATACTTTCGAAGCTTCATCACCCAAATGTGGTGGCATTTTATGGTGTAGTGCAGGACGGACCAGGAGGAACCTTAGCCACTGTTACAGAGTTCATGGTGGATGGTTCTCTAAGGCATGTTTTGCTCCGCAAGGATAGGTATCTAGATCGTCGCAAGAGGCTGATAATTGCCATGGATGCAGCCTTTGGAATGGAGTATTTGCACTCAAAAAATATTGTGCATTTTGACTTGAAATGTGACAATTTACTTGTGAACTTGAAGGATCCTTTACGGCCAATATGCAAGGTGGGTGATTTTGGCCTGTCAAAAATTAAACGAAATACCCTAGTTTCTGGTGGCGTGCGCGGAACTCTACCTTGGATGGCACCAGAGCTTTTGAATGGCAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTGTTCTCTTTCGGCATTGTATTATGGGAGATTCTTACTGGTGAGGAGCCATATGCTAATATGCACTATGGTGCAATCATAGGAGGTATTGTAAATAACACATTAAGGCCAACAATCCCCAGTTTCTGTGATCTTGAGTGGCGAACACTAATGGAGCAGTGTTGGGCACCTAATCCTGCAGTCAGACCATCCTTCACAGAAATTGCCGCCCGCTTACGGGTGATGTCTGCAGCTGCTAGTCAAACCAAAGGGCAGGGCTACAAGGCATCTAAATGA 3735 0.4155 MEQPRRQKQHQYNAMEPRNEEFHPAPHSVMQDHMDGMHINTRPSDHKISEKKPVLNYSIQTGEEFALEFMRDRVNLMKPVFPNIMDDPNYATGYMELKGILGISHTGSESGPDISMLPKVEKGPKEFDRRSSSLHRDRSNYGSVRSIPRTSSNQDNNRVLHGVASSGASDSSSMKMKVLCSFGGRILPRPSDGKLRYVGGETRIISIRKDIRWQELMQKTSSIYSETYVIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLVNREGSQKLRMFLFSMNDLDDTSTDGDTEIQYVVAVNGMDLGSRNHSILHGTRTSEDNIHELDGQNIEREARRAMIESTGVPSSSLTTNANSSLGIQSSQPMLPTSSNAYERYPLFYSNQHQETSQYPVHHGFDPSNNSALGQMPVSVPTHGLINQGIINEGLPPSEFQVQNSEMSAMQVKKRVNSPIKHESDPRKGFSLETPYPVPSQPFDGNLQGNVSEASVTVAVSGGHLPKLPSKSKGKQQHYEEASSLVNTMNSTHVPKSGEDDPYSTSTSALCPPYVDVESNVIDLSCLEPPPLPNRVYYSERIPREQADLLNRSAKSDDAHGSQLLMSELLSDFNQQNSDTKSNDKLHIGDLTSVSSMTAKPLHANGETIDDGLAQLPNYKQLPDATSKQLQHVDSELKPVLAKNEENKVAANGDWVLRSENETNDSKDNHNSDETNGTEHPAFRQIPSVEHDEKPASTLPDLNASEASTREFSNDARVQPQVFQDFPSDAVSMPAQGDILIDIDDRFPRDFLYDMFSKAILSEDSSYIGPLPTDRTGLSLNMENHEPKRWSFFHKLAHEGFDNVSLIDQDHLVFSSALGKVQGDSRSQQVAPILADGVSVGHPEPDLNYGEENKKNLPVTTRTETTVLHPNYDHTQVKKTENQNLDPVVENIRPKESEYEDGKHELRNIGHPQDPSLGDFDISTLQLINNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTEEFWREADILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSFCDLEWRTLMEQCWAPNPAVRPSFTEIAARLRVMSAAASQTKGQGYKASK 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0725 1244 SMART serkin_6 962 1228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0725 1244 MobiDBLite consensus disorder prediction 119 136 - -
Glsi14g0725 1244 MobiDBLite consensus disorder prediction 667 709 - -
Glsi14g0725 1244 PRINTS Tyrosine kinase catalytic domain signature 1081 1099 IPR001245 GO:0004672|GO:0006468
Glsi14g0725 1244 PRINTS Tyrosine kinase catalytic domain signature 1044 1057 IPR001245 GO:0004672|GO:0006468
Glsi14g0725 1244 PRINTS Tyrosine kinase catalytic domain signature 1152 1174 IPR001245 GO:0004672|GO:0006468
Glsi14g0725 1244 PRINTS Tyrosine kinase catalytic domain signature 1196 1218 IPR001245 GO:0004672|GO:0006468
Glsi14g0725 1244 MobiDBLite consensus disorder prediction 108 169 - -
Glsi14g0725 1244 Gene3D Phosphorylase Kinase; domain 1 955 1049 - -
Glsi14g0725 1244 PANTHER SERINE-THREONINE PROTEIN KINASE 220 1226 - -
Glsi14g0725 1244 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1050 1242 - -
Glsi14g0725 1244 SUPERFAMILY Protein kinase-like (PK-like) 954 1223 IPR011009 -
Glsi14g0725 1244 ProSitePatterns Protein kinases ATP-binding region signature. 968 993 IPR017441 GO:0005524
Glsi14g0725 1244 MobiDBLite consensus disorder prediction 689 706 - -
Glsi14g0725 1244 SUPERFAMILY CAD & PB1 domains 191 284 - -
Glsi14g0725 1244 Gene3D Transferase(Phosphotransferase) domain 1 1050 1243 - -
Glsi14g0725 1244 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 195 277 - -
Glsi14g0725 1244 CDD STKc_MAP3K-like 968 1225 - -
Glsi14g0725 1244 CDD PB1_UP2 179 275 - -
Glsi14g0725 1244 MobiDBLite consensus disorder prediction 137 169 - -
Glsi14g0725 1244 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 955 1049 - -
Glsi14g0725 1244 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1087 1099 IPR008271 GO:0004672|GO:0006468
Glsi14g0725 1244 Pfam Protein tyrosine and serine/threonine kinase 963 1225 IPR001245 GO:0004672|GO:0006468
Glsi14g0725 1244 ProSiteProfiles Protein kinase domain profile. 962 1227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0725 1244 Gene3D - 194 277 - -
Glsi14g0725 1244 SMART PB1_new 190 277 IPR000270 GO:0005515
Glsi14g0725 1244 Pfam PB1 domain 192 275 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0725 Glsi-ChrGlsi14 8151640 8158541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0725 1 1154 MAP Kinase Kinase Kinase AT1G79570 43.267 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Glsi14g0725 PK_Tyr_Ser-Thr 1.5e-61 CL0016