Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0722 ATGGATCAATCGGAGCAGACACAACAGCATCAGCAACAACAACAACAACAGCATGTGGTTGGAGTTGCAGCAGGCGCTGGCCAAATGACCTATTCTACTCATTACCAGACTGCTCCCATGGTGGCTTCTGGTACACCTGCTGTAGCCATACCTTCCCCAACACAGCCTCCGGCCCCCTTCTCAAATTCTCCTCACCAACTTGCATACCAACAAGCACAGCATTTTCACCATCAACAGCAGCAGCAGCAACAACAGCAGCTTCAGATATTCTGGGCTAACCAAATGCAAGAAATTGAACAAACAACTGACTTCAAGAACCATAGTCTCCCACTTGCTCGGATAAAGAAAATAATGAAAGCTGATGAGGATGTCCGGATGATTTCAGCAGAGGCCCCAGTCATATTTGCAAAAGCATGTGAAATGTTCATCTTGGAGTTGACCTTGCGATCTTGGATCCACACAGAAGAAAACAAGAGGAGAACACTACAGAAGAATGATATAGCAGCTGCTATTTCAAGAACTGATGTTTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAGTTGAAAGAAGAGGGACTTGGAGTAACAAAAGCTACTATTCCAGTAGGGGGTTCTCCAGCTGATATGCCATATTATTATGTCCCACCACAGCATCCTGTAGGACCTACAGGGATGATCATGGGAAAGCCAGTTGACCAAGCAGCACTATATGCTGCCCAGCAACCTCGACCCCAAATGGCATTCATGCCATGGCCACAGACACAACCTCAGCAACAGCCGCCACCTGAACAACAGCAAACAGACACTTGA 813 0.4613 MDQSEQTQQHQQQQQQQHVVGVAAGAGQMTYSTHYQTAPMVASGTPAVAIPSPTQPPAPFSNSPHQLAYQQAQHFHHQQQQQQQQQLQIFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKATIPVGGSPADMPYYYVPPQHPVGPTGMIMGKPVDQAALYAAQQPRPQMAFMPWPQTQPQQQPPPEQQQTDT 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0722 270 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 62 254 - -
Glsi14g0722 270 MobiDBLite consensus disorder prediction 1 20 - -
Glsi14g0722 270 MobiDBLite consensus disorder prediction 243 270 - -
Glsi14g0722 270 Pfam Core histone H2A/H2B/H3/H4 62 171 IPR007125 GO:0003677
Glsi14g0722 270 Gene3D Histone, subunit A 69 186 IPR009072 GO:0046982
Glsi14g0722 270 SUPERFAMILY Histone-fold 66 180 IPR009072 GO:0046982
Glsi14g0722 270 FunFam Nuclear transcription factor Y subunit gamma 74 186 - -
Glsi14g0722 270 MobiDBLite consensus disorder prediction 46 78 - -
Glsi14g0722 270 MobiDBLite consensus disorder prediction 61 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0722 Glsi-ChrGlsi14 8131548 8132360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0722 87 215 CCAAT-HAP5 Transcription Factor Family AT1G56170 91.538 6.31e-83 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Glsi14g0722 Histone 2.5e-18 CL0012