Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0705 ATGAAAGCAGGCATTCTTCTCCTCTATTTGACTCTAGCTGCTTTTTCTCTCACTCATTGTGATGCAGAGAGATCAATGAGGATATTAAAAGGCCCAACGCATGGGAGGATTTCGAACCACAAGAAGCACCCAAAGAAGTTGAGAATGATATTCAAGCATTTTGATCTTAACCCATCTTTAGATTCTTCAAAGGTACAGCCCTATAGTGTTAGCTCACCAAATTCTTTGCCACCTTATGAATCACTAGCTCCTATGCCATTTCCACAAAATAGCGCTCCTTTTTGTCCTTTCCCACCAAATCCTCCTTCTACCACAAGCATTCCAACTCCCACGGGGAATCAATTAACCCCACCATCTCCTTCCTATTACCCCTCTCCAGTTCTTCCAACCCAAAATCCACCTCCAAGCCCACCTGGGTCTTTGCCCACACCAACACCACAAAGTGTCCCAATCCCAGCTGGTAACATCCCAGGTTCATCACCTGAACCAACACAAAATCCCCCTATCATTTTTCCAGGCCCACCTGGATCTACAACGAGCCCACCAAGCCCACCTGGGTCTTTGCCCACACCAACACCACAAAGTGTCCCAAGCCCAGCTAACATCCCAGGCTCATCACCTGAACCAATACAAAATCCCCCTATCATTTTTCCAGCCCCACCTGGATCTACAACGAGCCCACCATATTTTGAGCCAAGCCCACCAGTTAACGTTCCATCCCCTAGTGGAGGTACTGTTCCAAGCCCAATAGTGTATGAGCCTCCTGTTGTATATCCACCACCAAGTGCGCCCCCACCACCCAACACCGGTCCAAACATAGCCTTGTGGTGTGTGGCCAAGCCATCAGTCCCAGACCCAATCATTCAAGAAGCCATGAACTATGCTTGTGGGTCAGGAGCAGATTGTGATTCCATTCAGCCCAATGGGCCATGCTTCGAGCCCAACACTTTATACGCACATGCATCATATGCCTTCAATAGTTACTGGCAAATGACCAAGGTTGCTGGGGGTACGTGCGAGTTTGGAGGGACAGCCATACTAGTTTCAGTGGACCCCAGTTCCATCTCCACCCCCAGCTCAGCCCGAATATCCTGCACTTTTTCCATCTTTTCTTCATTTTCTCTTGCCCTTCTGCGTGCTCCTTCTCCCGGGTTCCATCTCAATCTTTGTGCTCGGTTTCTTTGTGGGTCCAATCTCATCTCAGCTTGGTTTGTTCGTGCTCCATCTTCGTGGGTTCCATCTCAGCTTAGCTCGGTTCCTTCATTCTCCTTCTTCGCGGTTTCCATCTTAGCCTCTTCTTCTTTTTTTGGTCCTTGTTCGTGCTCATTGATTGATTGGCTTCAAAGAGATGGTATACTTCTTCTTGAGCTTGACCGGTTGCTCAGGCTAGGAGGTTATTTTGCATACTCTTCTCCAGAAGCATATGCGCAGGATGAAGAGGATCTAAGGATATGGAGAGAAATGAGTGATCTTGTGGGACGCATGTGTTGGAAAATAGCTGCAAAAAGGAACCAAACTGTCATCTGGCAGAAACCTCTGACAAATGACTGCTATATGGAAAGAGAACCTGGTATTCGCCCTCCTCTCTGCCAATCTGATGATGACCCAGATGCAGTTTGGAATGTGAATATGGAAGCTTGCATTACACCTTATTCTGTCCGTGAGTACCTTTTTCTTATTCCATTCCTTGTGCACAAAATGGAACATTCAAACTTATACATGCAGAAGCATGTGGGAATCAAGAAATTATTAAGAAGGAAGAAAGGTATAAGGATAGAGAATCTTTTAGCAAGCCCTTCAGGAAACACTGATCAAGCTTATGGAGCTTTTAGCAATGCCATTCAGGCTATAATTGAGGAAACTGATAGTGCTGTTACAAACCATGAGCTTGTCCTGAAGGCTAGGGAGAAGCTTCAGAGGCAGCAACCGTTTGCCGCTTTTGCAGAAAAACAAAAAAGGTCACAAAAATCTGCCCTTTCAGGTCAATCATCGATTTCTTGTACCCATGCTAAATCTGTGAAAGATGTCAAAGTCCAAATTAGATTGGCTTTTGCATCACCTTAA 2064 0.4603 MKAGILLLYLTLAAFSLTHCDAERSMRILKGPTHGRISNHKKHPKKLRMIFKHFDLNPSLDSSKVQPYSVSSPNSLPPYESLAPMPFPQNSAPFCPFPPNPPSTTSIPTPTGNQLTPPSPSYYPSPVLPTQNPPPSPPGSLPTPTPQSVPIPAGNIPGSSPEPTQNPPIIFPGPPGSTTSPPSPPGSLPTPTPQSVPSPANIPGSSPEPIQNPPIIFPAPPGSTTSPPYFEPSPPVNVPSPSGGTVPSPIVYEPPVVYPPPSAPPPPNTGPNIALWCVAKPSVPDPIIQEAMNYACGSGADCDSIQPNGPCFEPNTLYAHASYAFNSYWQMTKVAGGTCEFGGTAILVSVDPSSISTPSSARISCTFSIFSSFSLALLRAPSPGFHLNLCARFLCGSNLISAWFVRAPSSWVPSQLSSVPSFSFFAVSILASSSFFGPCSCSLIDWLQRDGILLLELDRLLRLGGYFAYSSPEAYAQDEEDLRIWREMSDLVGRMCWKIAAKRNQTVIWQKPLTNDCYMEREPGIRPPLCQSDDDPDAVWNVNMEACITPYSVREYLFLIPFLVHKMEHSNLYMQKHVGIKKLLRRKKGIRIENLLASPSGNTDQAYGAFSNAIQAIIEETDSAVTNHELVLKAREKLQRQQPFAAFAEKQKRSQKSALSGQSSISCTHAKSVKDVKVQIRLAFASP 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0705 687 MobiDBLite consensus disorder prediction 161 242 - -
Glsi14g0705 687 MobiDBLite consensus disorder prediction 113 151 - -
Glsi14g0705 687 FunFam Glucan endo-1,3-beta-glucosidase 4 271 362 - -
Glsi14g0705 687 Pfam X8 domain 275 345 IPR012946 -
Glsi14g0705 687 PRINTS Proline rich extensin signature 146 162 - -
Glsi14g0705 687 PRINTS Proline rich extensin signature 99 111 - -
Glsi14g0705 687 PRINTS Proline rich extensin signature 70 86 - -
Glsi14g0705 687 PRINTS Proline rich extensin signature 117 138 - -
Glsi14g0705 687 PRINTS Proline rich extensin signature 164 181 - -
Glsi14g0705 687 PANTHER BETA-1,3 GLUCANASE 274 367 IPR044788 -
Glsi14g0705 687 Gene3D - 272 372 - -
Glsi14g0705 687 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 439 554 IPR004159 GO:0008168
Glsi14g0705 687 MobiDBLite consensus disorder prediction 90 106 - -
Glsi14g0705 687 SMART X8_cls 275 367 IPR012946 -
Glsi14g0705 687 MobiDBLite consensus disorder prediction 90 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0705 Glsi-ChrGlsi14 7977664 7987944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0705 274 353 Glycoside Hydrolase AT3G13560 50.617 1.82e-20 93.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0705 14 7977664 7987944 Glsi14g0705 14 7977664 7987944 ECH