Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0681 ATGGAAAGAATGTTCCCTTCTAAGAAGCCCTCAACTATGAATTCCCATGACAGACCCATGTGTGTTCAAGGTGACTCGGGCCTTGTCCTCACCACTGACCCTAAGCCTCGCCTTCGCTGGACTGTTGAGCTCCATGAACGCTTCGTTGATGCTGTCACTCAGCTCGGAGGACCTGATAAGGCCACTCCTAAAACCATCATGAGGGTTATGGGGGTGAAGGGTCTTACCCTTTACCACCTCAAGAGCCATCTTCAGAAATTTAGGCTTGGGAAGCAACCCCACAAGGAATTCAATGATCACTCGATTAAGGATGGTATGAGAGCTTCGGCTTTAGAACTTCAACGAAATACTGCCTCCTCGTCCGCCATGATTGGTCGCAACATGAATGAGATGCAAATGGAAGTGCAGAGAAGACTGCATGAACAACTAGAGGTTCAAAAACACCTTCAGCTGAGGATAGAGGCTCAAGGGAAGTACATGCAGAGTATATTAGAGAAGGCTTGTCAAACACTTGCAGGTGAAAACATGGCAGCTGCTGCCCCTAACTTTAAGGGTATCCCTGAAATGGGAGGGCCAATGATGAAAGACTTTGGTTCCCCTCTTAGTTTTCCTTTTCAAGAGCTCAACATCTATGGAGGTGACCAACTTGATCACCTTCACCCCAACATGGATCACAAGCCTCAACTTGAAGCAGCTGGGTTCATGCCTACTAATAATAATAATAATAATGAAAATTTGTGTCTTGGGAAAAAGAGGCCTATCCCCTATAGTAGTACTACTATCGGGAGTACTGGGAAGACCCCTTTGTTTTGGAACGATGATCTTAGGCTTCAAGATTTGGGCACAGCTTCGTCTTGTCTTCATCAAGATGATCCTTTCAAAGGTTCATCAATGGATAGAGGCACTGAAATGGATCCCATGTGTGAGATCTATGACACCAAGCCTGGTCTCCAAGGGGATAATGAAAAGAAATTTGATGCATCAGTGAAGCTTGAAAGGCCTTCGCCAAGAAGAGCAGCTCTTCAGGGAGAAAGGATGAGCCCTATGATCAATACTGCTACTGTGGCACAAGGTAGAAGCTCACCATTTGGGTGA 1095 0.4594 MERMFPSKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASALELQRNTASSSAMIGRNMNEMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKACQTLAGENMAAAAPNFKGIPEMGGPMMKDFGSPLSFPFQELNIYGGDQLDHLHPNMDHKPQLEAAGFMPTNNNNNNENLCLGKKRPIPYSSTTIGSTGKTPLFWNDDLRLQDLGTASSCLHQDDPFKGSSMDRGTEMDPMCEIYDTKPGLQGDNEKKFDASVKLERPSPRRAALQGERMSPMINTATVAQGRSSPFG 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0681 364 MobiDBLite consensus disorder prediction 313 364 - -
Glsi14g0681 364 Pfam MYB-CC type transfactor, LHEQLE motif 131 170 IPR025756 -
Glsi14g0681 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 11 209 IPR044848 GO:0003700
Glsi14g0681 364 MobiDBLite consensus disorder prediction 1 20 - -
Glsi14g0681 364 MobiDBLite consensus disorder prediction 316 339 - -
Glsi14g0681 364 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Glsi14g0681 364 Gene3D - 34 92 - -
Glsi14g0681 364 MobiDBLite consensus disorder prediction 347 364 - -
Glsi14g0681 364 FunFam Myb family transcription factor 34 92 - -
Glsi14g0681 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
Glsi14g0681 364 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Glsi14g0681 364 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0681 Glsi-ChrGlsi14 7555634 7557588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0681 4 364 G2-like Transcription Factor Family AT1G79430 57.702 1.95e-128 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi14g0681 Myb_DNA-binding 2e-06 CL0123