Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0663 ATGCTGAATTCTCCTAGCAAGAAAACTGTGGGAATTAGAACTGAGATGGGCCATCGTTGCTGCAGCAAACAGAAGATCAAAAGAGGCCTCTGGTCTCCTGAAGAAGATGAGAAGCTTGTCAGATTCATCAACTCTCATGGCCATAAAAGTTGGAGTTCTGTACCAAAGCTTGCAGGCTTGCAGAGGTGTGGAAAGAGTTGCAGATTGAGATGGATAAACTATCTGAGACCTGATCTCAAGAGGGGTTCCTTCACTGCTGAAGAAGAACAGACCATCATAGACGTTCACAGAATTCTTGGAAATAGATGGGCTCAGATAGCAAAGCACCTCCCAGGAAGAACAGACAATGAAGTCAAGAATTTCTGGAACTCCTGCATTAAGAAGAAGCTCATTTCTCAAGGGTTCGACCCGCAAACTCACAATCTTCTCTCCACTCATAGAAGAGCCTCTGCGTGTAATAATAAAAATAATTCCAATTCCTTTTTCATTCTGAATCCACGGATAGAAAATGATCCCATGGACACAAGTAGATCATCATTTCTCACTCCACCGCTACCTGAAACTCACCCTAATATTGTCCAAACAACATCCTCCAGAATTTTCTCCTGCGAATCTCAACCCTCAGGCATTGTCGCCAACAAAGTTGACGACTCCCATAAATTCTTAGACTTCTCGTATGAATTACCATCCATTGAGAAGGCACCCAACAATTGTTCTTCTTCCTGCATGATGAATATGTGTAATGATAGCATCTGGGTTTCTAGTACTGATCATGAAAACTTCAGAGCTCAAACATTGGAAGGACTAATCCAATTAAAAGTACAAGAAGATCAGGATAAGGACAAGGCCTGTGATCATGGAAAGGGAATTGACGAAGTCAAAGAAGCTAACAAGGGGATTAATCCAGAAATGCATAGTGCTCGTTTGGACGGGTCTAACTTTGACTTTGGGTTGTTGGAGAGTGTACTTAACAACTCTGAATATATGTCTTATGATGATCTCAGCTCTATGGATGACCTTGCATGGAACTTTTAG 1035 0.4184 MLNSPSKKTVGIRTEMGHRCCSKQKIKRGLWSPEEDEKLVRFINSHGHKSWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFTAEEEQTIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGFDPQTHNLLSTHRRASACNNKNNSNSFFILNPRIENDPMDTSRSSFLTPPLPETHPNIVQTTSSRIFSCESQPSGIVANKVDDSHKFLDFSYELPSIEKAPNNCSSSCMMNMCNDSIWVSSTDHENFRAQTLEGLIQLKVQEDQDKDKACDHGKGIDEVKEANKGINPEMHSARLDGSNFDFGLLESVLNNSEYMSYDDLSSMDDLAWNF 344
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0663 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 130 IPR017930 -
Glsi14g0663 344 Gene3D - 25 81 - -
Glsi14g0663 344 ProSiteProfiles Myb-like domain profile. 76 126 IPR001005 -
Glsi14g0663 344 SMART sant 80 128 IPR001005 -
Glsi14g0663 344 SMART sant 27 77 IPR001005 -
Glsi14g0663 344 ProSiteProfiles Myb-like domain profile. 23 75 IPR001005 -
Glsi14g0663 344 CDD SANT 83 123 IPR001005 -
Glsi14g0663 344 SUPERFAMILY Homeodomain-like 25 122 IPR009057 -
Glsi14g0663 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 75 IPR017930 -
Glsi14g0663 344 Gene3D - 82 160 - -
Glsi14g0663 344 FunFam MYB transcription factor 20 80 - -
Glsi14g0663 344 Pfam Myb-like DNA-binding domain 81 124 IPR001005 -
Glsi14g0663 344 Pfam Myb-like DNA-binding domain 28 75 IPR001005 -
Glsi14g0663 344 CDD SANT 31 75 IPR001005 -
Glsi14g0663 344 FunFam Transcription factor MYB86 82 157 - -
Glsi14g0663 344 PANTHER MYB DOMAIN PROTEIN 55 16 265 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi14g0663 Glsi-ChrGlsi14 7353253 7354963 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0663 13 148 MYB Transcription Factor Family AT3G12720 84.559 4.14e-87 263
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi14g0663 Myb_DNA-binding 9.1e-15 CL0123