Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0662 ATGGCTCCAATGAGTCTCCCACCTGGGTTTAGATTCCACCCAACAGATGAAGAACTTGTCGCTTACTACTTGGAAAGAAAAATAACAGGCCGTTCTATAGAGCTTGAAATTATCCCAGAAGTTGATCTTTACAAATGTGAACCATGGGATTTACCAGAAAAATCGTTCTTGCCAAGCAAGGATTTGGAGTGGTATTTCTACAGTCCAAGAGATAGGAAGTACCCAAATGGGTCAAGAACTAACAGAGCAACAAGAGCTGGATACTGGAAAGCAACCGGAAAAGATAGGGCAGTACACTCTCAGAAGCGACCTGTAGGGATGAAGAAGACGTTGGTTTATTACAGAGGTAGAGCCCCTCATGGGATTAGAACCAACTGGGTCATGCATGAGTATCGCCTAACTGATTCGGTACCTCCCACTGCTTCTTCATCCCTGAAGGATTCCTATTCATTGTGTCGTGTTTTCAAGAAGACAATTCAAATCCCCAAGTCTAAAGAAGAAGAAGAACAAACTGAAAATAATGCAAAGAAGGAAGAGTCTATGTGGGTCTCAGAAGATCAACAAGGACTAATAGGGGACGATTCAAGTGCTATTTCCAGAGAAATGGAAGCCGCAGATGAAAAAGTCCTTAATGATCATGACCATCCTAAGTTTCCTTGTGATGCTTCTTCTTCAGATATTACTCAAGGAACACCCACAGAAACTGGTATAGCGGATGATTTTCAAGCACAGTTTGCTTCTGATGAAGCAAATAGTGCAGCTAATCCATACTCTCTTGCCATGGACTACCCATCAAATCTATTTCAGGATCTAGAGCTACCTATCTATGCGGGCATGCATTATCAACTTCCGTACCCACTTTTGGAGCTTGAAGATTTCCCTCAAATAAATCTAGCAGAGACAAAGCCAATGGTGAAGCCTGAAATGATTAATAATGATGGCATGTTATATGATCACAAATACAGAGACAGTACTATGAGTGGAACACTAGAAGAGATCATCTCTTTGTGTTCCTCTCAAGATCTAGCAATGCTAGATTGA 1041 0.415 MAPMSLPPGFRFHPTDEELVAYYLERKITGRSIELEIIPEVDLYKCEPWDLPEKSFLPSKDLEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRAVHSQKRPVGMKKTLVYYRGRAPHGIRTNWVMHEYRLTDSVPPTASSSLKDSYSLCRVFKKTIQIPKSKEEEEQTENNAKKEESMWVSEDQQGLIGDDSSAISREMEAADEKVLNDHDHPKFPCDASSSDITQGTPTETGIADDFQAQFASDEANSAANPYSLAMDYPSNLFQDLELPIYAGMHYQLPYPLLELEDFPQINLAETKPMVKPEMINNDGMLYDHKYRDSTMSGTLEEIISLCSSQDLAMLD 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0662 346 FunFam Nac domain-containing protein 86 15 160 - -
Glsi14g0662 346 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Glsi14g0662 346 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 214 - -
Glsi14g0662 346 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Glsi14g0662 346 MobiDBLite consensus disorder prediction 163 188 - -
Glsi14g0662 346 MobiDBLite consensus disorder prediction 163 183 - -
Glsi14g0662 346 Gene3D NAC domain 15 163 IPR036093 GO:0003677|GO:0006355
Glsi14g0662 346 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0662 Glsi-ChrGlsi14 7344890 7348688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0662 1 335 NAC Transcription Factor Family AT1G54330 54.303 2.16e-106 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi14g0662 NAM 1.6e-39 No_clan