Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0649 ATGGCCTCTTTCTCTGTCTCTCTCTCTTTGTTAGGACTAAAATATGCTCTTCCTTCATTTGTAGTTTTGGTTCTGTCTTTAGTATATTTTGTGCTTGACGTATATTCACGAGAATTATCGAATAAAAGAGCAAACGCTGATATGCAGAAGAAACCGTATACCACTGAAAGAGGAAATGTTGAGGAAACCAAATGCCACGGGGAAATCGGAAAAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTTGCGCAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCCCCGAAGGGACGATCCTATCGTCTATGCATTGGATATATAAATCCATCGATATTTTGAAGTCTTACCAATGTGGGACTCCTGCTGAAGCCGCTGGGGTGTTATTTTCTTGTTCATCGATGGCGTCAAAGCCTGTCAAGCGGCCTGACTTATCTGAGATGAACTGCAATTCATCAGAAGAACCTCTCAAGACAGATCTTATTGCTCACAGAAACGCCAATTCAGCAAATACTTCAAGTCATTCCAAAATGATTAATAAAGAAGCAAAAGATGCCAATTCAACTGGTAATCTGTCATCTAAACCTCAGAAACTAGAACCCCCTGCTCAGGGACCAATTCCAGGCACAAGGATGACTGCAAATTATGATCCCCCAAGTACCTCACCAATAGGAAATACATGGGGATTGCCTACACATGCAAAGACCAACAACCATGGCCAAGGGAGTGGCAATAGCTCTCGTAGTGACAGTTTAGAGAGCACCAGTGCACCCATTAAGCCACATACCGGTGGTGATGTACGGTGGGATGCAATTAATATGGTTTCAAGGGGTGGCCCTCTTAATCTTAGCCATTTTCGGCTTCTCAAGCGCCTTGGGTATGGAGACATTGGAAGTGTATATCTTGTGGAACTTAGAGGAACTAGAACCTACTTTGCCATGAAAGTCATGGATAAGGCATCTCTAGCTAGCAGAAATAAGCTATTGCGAGCACAAACAGAGAGGGAGATTCTTGGACTTCTTGACCACCCATTCTTACCCACTTTATATTCTTACTTTGAAACTGATAAGTTCTACTGTTTGGTCATGGAGTTCTGTAGTGGAGGTAATCTTCATTCTCTTCGACAGAAGCAACCTAACAAGCATTTTACTGAAGAAGCTGCACGGTTTTATGCTTCAGAGATATTGTTAGCTCTGGAGTACCTGCACATGCTGGGCATTGTGTACCGAGACTTGAAGCCAGAGAATGTCCTAGTGCGAGAAGAAGGCCATATAATGCTGTCAGATTTTGATTTATCGCTTCGCTGCTCTGTCAGTCCAACACTTGTCAAGTCTTCGTCTGCCCATTTAAGCAATAGCAGTGGTTCTACTTCTGGGGGAATTTTAAATGATGAGCAGGCAGTGCAGAGTTGTATTCAGCCATCAACCTTCTTCCCACGCATTTTACCTTCAAAGAAGACTCGCAAAACAAAATCAGATTTTGGCCTGTTGGTTGGAGGTGCTCTTCCTGAATTAATGGCGGAGCCAACAAACGTGAGGTCTATGTCGTTTGTAGGGACACACGAATACCTTGCTCCGGAGATTATACGAGGAGAGGGCCACGGCAGTGCAGTAGATTGGTGGACATTTGGTATCTTCTTGTATGAGCTTTTGCATGGGACAACTCCCTTCAAGGGTGCAGGAAATAGAGCCACACTTTTTAACGTTGTGGGGCAGCCATTGAAGTTCCCAGAAACTCCCCATGTCAGTTCTGTGGCAAGAGATCTTATAAAAGGATTGTTGGTGAAGGAACCTAACAAGAGAATTGCATATGTAAGAGGAGCTACAGAAATAAAGCAGCACCCATTTTTTGAGGGATTGAACTGGGCTCTAGTAAGAAGTGCCATGCCTCCACACATACCAGATGCTATAGATTTTTCCCAGTATGCCAGCAAGGAAACAGCACCCTCCAAGGACAAGAAAATGACAGACATTGCAAATGATAAAAACAACAATTCTCCCAACGATTCTTCGTACATAGATTTTGAGTATTTTTAG 2055 0.4331 MASFSVSLSLLGLKYALPSFVVLVLSLVYFVLDVYSRELSNKRANADMQKKPYTTERGNVEETKCHGEIGKKFGPFLDLCVSSLRRGHANLLCIVPILSDVPEGTILSSMHWIYKSIDILKSYQCGTPAEAAGVLFSCSSMASKPVKRPDLSEMNCNSSEEPLKTDLIAHRNANSANTSSHSKMINKEAKDANSTGNLSSKPQKLEPPAQGPIPGTRMTANYDPPSTSPIGNTWGLPTHAKTNNHGQGSGNSSRSDSLESTSAPIKPHTGGDVRWDAINMVSRGGPLNLSHFRLLKRLGYGDIGSVYLVELRGTRTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKHFTEEAARFYASEILLALEYLHMLGIVYRDLKPENVLVREEGHIMLSDFDLSLRCSVSPTLVKSSSAHLSNSSGSTSGGILNDEQAVQSCIQPSTFFPRILPSKKTRKTKSDFGLLVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGNRATLFNVVGQPLKFPETPHVSSVARDLIKGLLVKEPNKRIAYVRGATEIKQHPFFEGLNWALVRSAMPPHIPDAIDFSQYASKETAPSKDKKMTDIANDKNNNSPNDSSYIDFEYF 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0649 684 MobiDBLite consensus disorder prediction 190 204 - -
Glsi14g0649 684 FunFam Serine/threonine-protein kinase AGC1-5 290 375 - -
Glsi14g0649 684 FunFam Serine/threonine-protein kinase AGC1-7 516 641 - -
Glsi14g0649 684 Gene3D Phosphorylase Kinase; domain 1 291 375 - -
Glsi14g0649 684 ProSiteProfiles Protein kinase domain profile. 292 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0649 684 SUPERFAMILY Protein kinase-like (PK-like) 282 644 IPR011009 -
Glsi14g0649 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Glsi14g0649 684 MobiDBLite consensus disorder prediction 220 264 - -
Glsi14g0649 684 MobiDBLite consensus disorder prediction 653 677 - -
Glsi14g0649 684 CDD STKc_phototropin_like 290 644 - -
Glsi14g0649 684 Pfam Protein kinase domain 517 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0649 684 Pfam Protein kinase domain 293 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0649 684 PANTHER FLIPPASE KINASE 1-RELATED 172 652 - -
Glsi14g0649 684 Gene3D Transferase(Phosphotransferase) domain 1 516 641 - -
Glsi14g0649 684 Gene3D Transferase(Phosphotransferase) domain 1 376 441 - -
Glsi14g0649 684 FunFam serine/threonine-protein kinase D6PK-like 376 443 - -
Glsi14g0649 684 MobiDBLite consensus disorder prediction 190 269 - -
Glsi14g0649 684 SMART serkin_6 292 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0649 Glsi-ChrGlsi14 7178830 7188275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0649 258 684 AGC Kinase Gene Family AT1G79250 75.501 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Glsi14g0649 Pkinase 1.8e-37 CL0016