Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0644 ATGATGGCAGGCAGTGGACAACTAACAGTTCCTCCAGGGTTCCGGTTTCACCCTACTGATGAGGAGCTTCTTTACTATTACCTGAGGAAGAAAGTCTCTTATGAAGCCATTGATCTTGATGTCATCAGAGAAGTAGATCTCAACAAACTTGAGCCTTGGGACCTCAAAGAGAAATGTAGGATTGGATCAGGACCTCAGAATGAGTGGTATTTCTTCAGCCACAAAGACAAGAAATACCCAACAGGAACACGAACAAACCGAGCAACGACGGCTGGCTTCTGGAAAGCAACTGGGAGGGACAAGGCTATATACCTCAGCAATTCAAAGAGGATTGGGATGAGAAAAACCCTAGTCTTCTACACTGGCCGTGCTCCTCATGGCCAAAAAACTGACTGGATCATGCATGAGTACCGCCTTGACGAAGATGATGCTGAGGTTCAGGAAGATGGGTGGGTGGTGTGCAGGGTTTTCAAGAAGAAGAACCACATTAATAGAGGATTACAAGGAGAAATGGAAGAAGAGCACCAAATCACCCACATGAGAACAGGTACTGGTTCAAGCCTGCAGATACTAGAACCAAAACAACACCATCATATTCACCAAGGGCTATATCATAATAATTACAGCTTTGATGGGTCAATGCATCTCCCTCAGTTGTTCAGCCCAGAATCATCCATGAATGCCATGGACGTCCTAGAGTGCTCACAGAGCTTGTTGAGGCTCACAACCAGTCGTGGTTCTGGGCTTGGTCTCATGCAACAACAAGAAGGTGATCAGAGTCAGAGAATGAATATTGGATCAGACTGGTCATTTTTGGACAAGCTTCTTGCATCATCACACCACCATGGCATAGATCAAAGCAAATGTAACCCTGCTTCAGTACATACTGCTGTTTCAGTGGGTGCTTCTTCTTCAACCCAGAAATTCCCATTTCATTACCTTGGTTGTGAGACTAGTGATGATATTATGAAATTCTCTAAGTAA 984 0.4461 MMAGSGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLSNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDEDDAEVQEDGWVVCRVFKKKNHINRGLQGEMEEEHQITHMRTGTGSSLQILEPKQHHHIHQGLYHNNYSFDGSMHLPQLFSPESSMNAMDVLECSQSLLRLTTSRGSGLGLMQQQEGDQSQRMNIGSDWSFLDKLLASSHHHGIDQSKCNPASVHTAVSVGASSSTQKFPFHYLGCETSDDIMKFSK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0644 327 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Glsi14g0644 327 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Glsi14g0644 327 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Glsi14g0644 327 FunFam NAC domain-containing protein 19 163 - -
Glsi14g0644 327 Gene3D NAC domain 19 164 IPR036093 GO:0003677|GO:0006355
Glsi14g0644 327 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0644 Glsi-ChrGlsi14 7131581 7133868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0644 2 327 NAC Transcription Factor Family AT1G79580 54.805 2.96e-121 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi14g0644 NAM 3.3e-38 No_clan