Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi14g0642 | ATGGGTCCCCTATTGGCTTTTGAGGGTCCACGTGGAATCCCTTGTGTGGCTCATCTTTCACTGTCTCTTCTTTTTAAGACTTCAACTCTTTTGACGTTTGACTTTCCACTTAATACCCTCACCACCCTACCCTCGATATCATTAACAACACTTTCTTTCCTCCTTGGGATGGTTCAGGGAACTCCAGTGAACATCATCGTTGGATCACACGTTTGGGTTGAGGATCATGAGTTAGCTTGGATTGATGGTGAAGTGACAGACATCAATGGCAGCGATGCCACCATCGTTGCTACAAATGGCAAAACTATTGTAGCAGACATTTCTAGTATATATCCTAAAGATACAGAGGCACCGCCAGCAGGGGTCGATGACATGACCAAGTTAGCATACCTCCATGAGCCAGGAGTCCTGCATAACCTTGCTTGTCGTTTTGCTCTCAATGAGATATATACATATACAGGGAATATCTTGATAGCAGTAAATCCTTTTCGGAGACTGCCACACTTGTATGACATCCACATGATGGAGCAGTACAAAGGAGCAGCATTCGGGGAGCTGAGCCCTCACCTTTTTGCTGTTGCAGACACCTGTTATAGGGCAATGATTAATGATAATGGAAGCCAGTCCATTTTGGTAAGTGGAGAGAGTGGAGCTGGTAAGACAGAGACAACAAAAATGCTTATGAGATATCTAGCATTCATGGGGGGCAGATCTAATACAGAAGGAAGAACAGTAGAACAACAGGTTTTGGAGTCCAATCCAGTTTTGGAAGCATTTGGAAACGCCAAAACTGTCAAAAATAATAATTCAAGTCGTTTTGGTAAATTTGTTGAAATTCAATTTGACAAGAATGTGAAGATTTCTGGAGCTGCAATCCGTACATATCTCCTTGAAAGGTCTAGAGTTTGCCAGGTCTCTGACCCAGAGAGGAACTATCATTGCTTTTACATGCTTTGTGCAGCACCACCAGAGGATGTCAAAAAGTACAAGTTAGGGGACCCAAGGCAATTTCACTATCTTAATCAATCCAACTGCTATGAAGTAGCAAATGTAGATGATGCAAAAGAATACTTGGAGACCAGAAATGCCATGGATATTGTAGGCATCAGCCAGGATGAGCAGGATGCTATTTTTCGTGTGGTTGCTGCAATCCTCCATCTCGGAAACATTGACTTCATCAAAGGGAAGGAAGTTGATTCTTCCAAGTTAAAAGATGAGAAATCAATCTTCCACCTTCGCACAGTGGCAGAGCTACTCATGTGTGATGAGAAAGCTCTAGAAGACTCACTTTGCAAGCGCGTCATAGTTACTCCTGATGGCAACATCACAAAACCACTAGACCCAGACTCGGCTGCTTTAAGTCGAGATGCTTTGGCGAAGACTGTGTACTCAAGGCTGTTTGATTGGATTGTGGACAAGATAAACAGTTCAATTGGTCAAGATCCCAATGCAGTCAGCTTAATAGGAGTCCTTGACATTTATGGGTTTGAAAGCTTCAAAATCAACAGTTTTGAGCAACTATGTATCAACCTAACAAATGAGAAGTTGCAACAACATTTTAACCAGCACGTATTTAAAATGGAGCAAGAAGAGTACACAAAGGAGGAAATCAACTGGAGCTATGTAGAATTTGTGGATAATCAAGATGTTCTGGATCTTATCGAAAAGAAACCTGGAGGAATAATTGCTCTTCTTGATGAAGCCTGCATGTTCCCCAAGTCAACCCATGAAACATTTGCACAAAAATTGTATCAGACATATAAAGCACATAAGCGCTTCAGCAAGCCAAAACTTGCTCGAACAGATTTCACAATTAACCATTATGCCGGAGATGTCACATACCAAGCAGATCAATTTCTAGATAAAAATAAAGATTATGTTGTAGCAGAGCATCAAGCACTTTTAAATGCCTCCAAGTGCTCATTTGTTGCTAATCTTTTTCCTCCATTACCTGAGGAGTCATCAAAGCAATCAAAATTCTCTTCCATCGGTTCGCGTTTCAAGCAACAACTACAATCTCTGATGGAGACATTGAACACAACAGAACCACATTACATTAGATGTGTGAAACCAAATACTGTTTTGCAGCCTGGAATATTTGAGAACTTCAATGTCTTAAACCAGTTGAGATGTGGGGGAGTACTTGAGGCAATTAGGATTAGTTGTGCTGGATATCCAACAAAAAGATCATTTGACGAGTTCCTTGATCGTTTTGGAATGCTAGCCCCCGATGTCCTAGATGGATCTGAAGAGAAAACAGCATGTATTGCCATATGTGATAAGATGGGATTAAAAGGCTATCAAATGGGAAAAACAAAGGTATTTCTCAGAGCTGGTCAGATGGCTGAATTAGATGCACGTCGAGCCGAAGTCTTAGCTAAAGCTGCTAGATGTATACAGAGACAAATCCGAACACATTTGACCAGAAAAGAGTTCATCACTCTGAGAAAGGCCACAATTCATATCCAAAAGAAATGGAGAGCGAAACTTGCACGTAAACTCTATGAACAAATGCGGAGGGAAGCAGCTTCTATCCGCATACAGAAACACGCACGTGCACACGCAGCAAGAATGCATTATACATCATTGCAAGCATCAGCAATAGTTGTTCAGTCGGGGTTAAGAGCAATGGCAGCCCGGAACGAATACAGGTACAGGCGAAGAACGAAGGCTGCAACCAAAGTTCAGACACAATGGAGAAGAGTCCAAGCTTTTACTGCTTACAAGAAGCAGAAGAGAGCAACTATTGCACTTCAATGTCTCTGGAGAGCCAAAGTAGCTAGGAAAGAGCTCAGAAAGCTAAGGATGGCTGCGAGGGAAACAGGGGCACTTAAGGAGGCAAAGGACAAGTTGGAGAAGCGTGTTGAAGAGTTAACATGGCGACTGGAATTTGAAAAGCACTTGAGGATTGACCTTGAAGAAGCTAAAGGGCAAGAAATTTTGAAGTTACAGAGTGCTCTACATGAAATGCAAGGTCAGATAGAGGAAGCACAAGCTGCAATTATACACGAGAAAGAAGCAGCAAAACTAGCAATTGAATCAGCACCACCAGTCATTAAAGAGGTACCTGTTGTGGACAACACCAAGCTAGAGTTACTGACAACTAAAAATGTGGAGCTAGAGGGTGAAGTAGAAGAACTGAAGAGGAAGATTGAAGAATTCGAGGTAAGGTATACAGACATACAAAAAGAGAATAAAGCAACGCTGAAAGAGGCAGAAGAAGCACAATTGAAAGCAACACAACTTCAGGAGACTATCGAAAGATTAGAATTGAATTTGTCCAACCTTGAGTCTGAGAATCAAGTTCTACGTCAGCAAGCTTTGGTTGAATCAAAAAATGAGGAACTCTCTGACGAGCTTAAAACCCTCAAGGATCAGATAGCAAATCTAGAATCAGAGAATGAATTTCTCCGGTGCAAGGCAGCAGCTGCTGTCGAGCAGAAAGTTCATCCAGAAAAAATGGCAACAGAAGACCAGGAAGCTGTTATTGTGGAGCAAATTCAACAGAAAGTTTACCCAGATACAATAACTTTACAAGTAAAGAATTTGGATAATGGAAACCAAACAGCTGAAGAATGCCAAACAAGAAAAGAACCTAGACAACCTGTCTCCTTTCTTACAAAGCAAAGATCGCTCACAGACAGGCAGCAGGAAAGTCATGATGCACTGCTCAAGTGTCTTGCAGAAGATAAGAGATTTGAGAAAAACAGACCAGTTGCTGCCTGTATTATCTATAAAGCACTTCTTCAATGGCGTTCCTTTGAAGCTGAGAAGACACATATATTTGATAAAATTATTCACATAATCCGATCTTCTATAGAGAGTCAAGAAGGAATCAGTGACCTAGCATATTGGCTCTCAACAACTTCAACATTACTGTTTTTTTTACAAAGCACACTCAAGGCCAGCAATACAACTAAGGCAGTATCACGTAATCGAAACTCCCCCGCCACTCTATTTGGCAGAATGGCACAAGGCCTGCTTTCATCCTCTATGGGCATGGGAGTTTCAAGTGGCTACAGTGGAATGGTGGGCAAGCAAAATGAGCAATCTAAAGTGGAAGCCAAGTATCCAGCCATTCTTTTTAAGCAGCATTTAACTGCATATGTTGAGAAGATATATGGAATGATCCGTGATAGTGTGAAGAAAGAGATCAGTCCATTCCTAAATTTGTGCATTCAGGCACCGAGATCTATAAGAACTAGATCACTACGAGGCTCATCAAGAAACATCCACTCAAATATAGTTGCAAAACAACAGGCATCAAATATGCATTGGAAAAACATTGTCAATAAGTTAGATCATACCTTGGGTATATTGTCTGACAACTATGTCCCTTCCATGATAACAAGGAAGATATTTAGTCAGGTTTTCTCTTTCATGGATGTCCAACTTTTCAATAGTTTGTTGCTTCGTCGTGAGTGCTGTTCCTTTAGCAATGGAGAATATTTAAAGGCAGGTTTGCATGAATTGGAACAATGGTGTATCAAAGCAACTTATCAGTTTGCTGGATCTTCTTGGGATGAACTCAAACACATACGCCAAGCTGTGAACTTTCTGGTTTTGCATCAAAAGACACAAAAATCATTGGATGAGATTACAAATGAACTCTGTCCGGTGTTAAGTATTCCACAAATATATCGTATTGGAACTATGTTCTGGGATGACAAGTATGGAGCACAGGGGTTATCTCCAGAAGTGATCAGCAGAATGAGAGTGCTTATGGTGGAGGACTCAATAAACATACCCAATAACTCCTTCCTCCTCGAGGTGAATTCCAGCATACCTTTTTCAATGGAGGAGATGTTCCGTTCCATGAGTGACATCCGAATATCAGATATCGACGTGGATCCACCAACAATCCTCAGGCAAAGATCTGACTTCCAATTCTTATTGCAACAAATGGATAGTGAATCTCAATGA | 4923 | 0.4126 | MGPLLAFEGPRGIPCVAHLSLSLLFKTSTLLTFDFPLNTLTTLPSISLTTLSFLLGMVQGTPVNIIVGSHVWVEDHELAWIDGEVTDINGSDATIVATNGKTIVADISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLACRFALNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAAFGELSPHLFAVADTCYRAMINDNGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSNTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNVKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKYKLGDPRQFHYLNQSNCYEVANVDDAKEYLETRNAMDIVGISQDEQDAIFRVVAAILHLGNIDFIKGKEVDSSKLKDEKSIFHLRTVAELLMCDEKALEDSLCKRVIVTPDGNITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINSSIGQDPNAVSLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTYKAHKRFSKPKLARTDFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNASKCSFVANLFPPLPEESSKQSKFSSIGSRFKQQLQSLMETLNTTEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRSFDEFLDRFGMLAPDVLDGSEEKTACIAICDKMGLKGYQMGKTKVFLRAGQMAELDARRAEVLAKAARCIQRQIRTHLTRKEFITLRKATIHIQKKWRAKLARKLYEQMRREAASIRIQKHARAHAARMHYTSLQASAIVVQSGLRAMAARNEYRYRRRTKAATKVQTQWRRVQAFTAYKKQKRATIALQCLWRAKVARKELRKLRMAARETGALKEAKDKLEKRVEELTWRLEFEKHLRIDLEEAKGQEILKLQSALHEMQGQIEEAQAAIIHEKEAAKLAIESAPPVIKEVPVVDNTKLELLTTKNVELEGEVEELKRKIEEFEVRYTDIQKENKATLKEAEEAQLKATQLQETIERLELNLSNLESENQVLRQQALVESKNEELSDELKTLKDQIANLESENEFLRCKAAAAVEQKVHPEKMATEDQEAVIVEQIQQKVYPDTITLQVKNLDNGNQTAEECQTRKEPRQPVSFLTKQRSLTDRQQESHDALLKCLAEDKRFEKNRPVAACIIYKALLQWRSFEAEKTHIFDKIIHIIRSSIESQEGISDLAYWLSTTSTLLFFLQSTLKASNTTKAVSRNRNSPATLFGRMAQGLLSSSMGMGVSSGYSGMVGKQNEQSKVEAKYPAILFKQHLTAYVEKIYGMIRDSVKKEISPFLNLCIQAPRSIRTRSLRGSSRNIHSNIVAKQQASNMHWKNIVNKLDHTLGILSDNYVPSMITRKIFSQVFSFMDVQLFNSLLLRRECCSFSNGEYLKAGLHELEQWCIKATYQFAGSSWDELKHIRQAVNFLVLHQKTQKSLDEITNELCPVLSIPQIYRIGTMFWDDKYGAQGLSPEVISRMRVLMVEDSINIPNNSFLLEVNSSIPFSMEEMFRSMSDIRISDIDVDPPTILRQRSDFQFLLQQMDSESQ | 1640 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi14g0642 | 1640 | ProSiteProfiles | IQ motif profile. | 792 | 819 | IPR000048 | GO:0005515 | |
| Glsi14g0642 | 1640 | FunFam | unconventional myosin-Va | 794 | 842 | - | - | |
| Glsi14g0642 | 1640 | ProSiteProfiles | IQ motif profile. | 840 | 866 | IPR000048 | GO:0005515 | |
| Glsi14g0642 | 1640 | ProSiteProfiles | IQ motif profile. | 911 | 940 | IPR000048 | GO:0005515 | |
| Glsi14g0642 | 1640 | ProSiteProfiles | IQ motif profile. | 863 | 892 | IPR000048 | GO:0005515 | |
| Glsi14g0642 | 1640 | MobiDBLite | consensus disorder prediction | 1192 | 1214 | - | - | |
| Glsi14g0642 | 1640 | FunFam | unconventional myosin-Va | 891 | 938 | - | - | |
| Glsi14g0642 | 1640 | Coils | Coil | 934 | 968 | - | - | |
| Glsi14g0642 | 1640 | FunFam | Class V myosin | 497 | 645 | - | - | |
| Glsi14g0642 | 1640 | Gene3D | - | 310 | 368 | - | - | |
| Glsi14g0642 | 1640 | Gene3D | - | 725 | 787 | - | - | |
| Glsi14g0642 | 1640 | ProSiteProfiles | IQ motif profile. | 888 | 917 | IPR000048 | GO:0005515 | |
| Glsi14g0642 | 1640 | CDD | MYSc_Myo11 | 134 | 777 | IPR036018 | - | |
| Glsi14g0642 | 1640 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 94 | 843 | IPR027417 | - | |
| Glsi14g0642 | 1640 | ProSiteProfiles | Myosin motor domain profile. | 120 | 789 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Glsi14g0642 | 1640 | Pfam | Myosin head (motor domain) | 122 | 777 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Glsi14g0642 | 1640 | SMART | DIL_2 | 1452 | 1559 | IPR002710 | - | |
| Glsi14g0642 | 1640 | Gene3D | - | 890 | 939 | - | - | |
| Glsi14g0642 | 1640 | Gene3D | - | 843 | 889 | - | - | |
| Glsi14g0642 | 1640 | Gene3D | - | 790 | 842 | - | - | |
| Glsi14g0642 | 1640 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 843 | 940 | IPR027417 | - | |
| Glsi14g0642 | 1640 | Pfam | DIL domain | 1453 | 1556 | IPR002710 | - | |
| Glsi14g0642 | 1640 | SMART | iq_5 | 887 | 909 | IPR000048 | GO:0005515 | |
| Glsi14g0642 | 1640 | SMART | iq_5 | 910 | 932 | IPR000048 | GO:0005515 | |
| Glsi14g0642 | 1640 | SMART | iq_5 | 791 | 813 | IPR000048 | GO:0005515 | |
| Glsi14g0642 | 1640 | SMART | iq_5 | 839 | 861 | IPR000048 | GO:0005515 | |
| Glsi14g0642 | 1640 | SMART | iq_5 | 814 | 836 | IPR000048 | GO:0005515 | |
| Glsi14g0642 | 1640 | SMART | iq_5 | 862 | 884 | IPR000048 | GO:0005515 | |
| Glsi14g0642 | 1640 | Gene3D | Kinesin motor domain | 123 | 720 | IPR036961 | - | |
| Glsi14g0642 | 1640 | PRINTS | Myosin heavy chain signature | 207 | 232 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Glsi14g0642 | 1640 | PRINTS | Myosin heavy chain signature | 254 | 281 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Glsi14g0642 | 1640 | PRINTS | Myosin heavy chain signature | 487 | 515 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Glsi14g0642 | 1640 | PRINTS | Myosin heavy chain signature | 150 | 169 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Glsi14g0642 | 1640 | PRINTS | Myosin heavy chain signature | 540 | 568 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Glsi14g0642 | 1640 | FunFam | Myosin heavy chain | 310 | 365 | - | - | |
| Glsi14g0642 | 1640 | ProSiteProfiles | IQ motif profile. | 815 | 844 | IPR000048 | GO:0005515 | |
| Glsi14g0642 | 1640 | Pfam | Myosin N-terminal SH3-like domain | 67 | 107 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Glsi14g0642 | 1640 | Gene3D | - | 497 | 681 | - | - | |
| Glsi14g0642 | 1640 | FunFam | Myosin 2 | 370 | 485 | - | - | |
| Glsi14g0642 | 1640 | Coils | Coil | 1030 | 1147 | - | - | |
| Glsi14g0642 | 1640 | ProSiteProfiles | Dilute domain profile. | 1263 | 1577 | IPR002710 | - | |
| Glsi14g0642 | 1640 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 66 | 115 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Glsi14g0642 | 1640 | FunFam | unconventional myosin-Va | 843 | 890 | - | - | |
| Glsi14g0642 | 1640 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 370 | 659 | - | - | |
| Glsi14g0642 | 1640 | SMART | MYSc_2a | 114 | 790 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Glsi14g0642 | 1640 | Coils | Coil | 980 | 1007 | - | - | |
| Glsi14g0642 | 1640 | CDD | MyosinXI_CBD | 1214 | 1600 | IPR037975 | GO:0007015 | |
| Glsi14g0642 | 1640 | PANTHER | MYOSIN | 112 | 1565 | - | - | |
| Glsi14g0642 | 1640 | Pfam | IQ calmodulin-binding motif | 794 | 812 | IPR000048 | GO:0005515 | |
| Glsi14g0642 | 1640 | Pfam | IQ calmodulin-binding motif | 842 | 860 | IPR000048 | GO:0005515 | |
| Glsi14g0642 | 1640 | Pfam | IQ calmodulin-binding motif | 913 | 932 | IPR000048 | GO:0005515 | |
| Glsi14g0642 | 1640 | Pfam | IQ calmodulin-binding motif | 816 | 835 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi14g0642 | Glsi-ChrGlsi14 | 7107046 | 7120431 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi14g0642 | 174 | 1635 | Myosins gene family | AT2G31900 | 74.932 | 0.0 | 2273 |