Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0620 ATGGAGCTTGGTCTGAGCTTGGGAGATCGTGCTTTAAACCCTTCTCGGTTCACGGAAAAGCCTCCTGCAGAAGCTTCCAGCCATCTGGGATTAGGCTTCAACACCACCTTATCAATCGGTCCCATTTGTAGCAGAAGATATCAAGAAGAAGAAGAAGAAGTAGAAGCAGAAAAGCCGAAGAAAAATCAAAGTATTGATGAAGACCATGGAACTACAGCTGAAATTCGTAGCCTTTCTCCTAACCCCAGTAACCCTGTACGACAGCTTGATCTTCTTCCTCGCTCACCAGTCGTTGCTCGTATCAATCCACCTTCCCACCTCTCCTTTCCATGGCCTACTCCTTCTGAAAACGGGAGTTCCGCTGAGGCGGGTTCTTCAAGGGGCTTGGACGTGAACATGTTGCCACCGCCGCCGCCGCCGGCTGATGAGGAGACGGCGGTGTCATCTTCTCCCAACAGCTCAGCGTCGTCGTTTCAGATGGATCTCTGTATATACAGCAGAGGAGGGAGTATTAACGGCAAGAGGGACTCTGATGGCGAGGCTTATGATCAAAGGGCTTCTTCCAGAGCAAGCGATGAAGATGAAAATGGAGGTAGTACCAGGAAGAAGCTTAGACTCTCTAAAGAACAATCTGCCTTCCTTGAAGAGAGCTTCAAAGAACACAGTACTCTTAACCCAAAACAAAAGCTTGCCCTTGCGAAACAACTCAATCTTCGCCCTCGCCAAGTAGAAGTCTGGTTTCAAAACAGAAGAGCAAGGACGAAGTTGAAGCAGACAGAGGTGGATTGTGAGTACTTGAAGAGGTGCTGCGAGACACTTACAGAAGAGAACAGAAGGCTTCACAAAGAGCTTCAAGAATTAAGGGCTTTGAAGACTTCAAATCCATTCTACATGCAATTACCAGCTACTACCTTGACCATGTGTCCCTCTTGTGAGCGAGTTGCTACCAATTCCACCTCCATCACCACTTCCTCTGCTACTCCTACCACCATGGCCAAAACCATTGACCCCACCACCTCCAAATCCGTGGGATTCCCCCTAGGCAAGCCTAAAATCTATCCATTCGCTCACACCCATCCCCATCCCCACCAGTCCACAGCTTCTTGA 1107 0.4887 MELGLSLGDRALNPSRFTEKPPAEASSHLGLGFNTTLSIGPICSRRYQEEEEEVEAEKPKKNQSIDEDHGTTAEIRSLSPNPSNPVRQLDLLPRSPVVARINPPSHLSFPWPTPSENGSSAEAGSSRGLDVNMLPPPPPPADEETAVSSSPNSSASSFQMDLCIYSRGGSINGKRDSDGEAYDQRASSRASDEDENGGSTRKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKTSNPFYMQLPATTLTMCPSCERVATNSTSITTSSATPTTMAKTIDPTTSKSVGFPLGKPKIYPFAHTHPHPHQSTAS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0620 368 Pfam Homeobox associated leucine zipper 257 291 IPR003106 GO:0006355|GO:0043565
Glsi14g0620 368 MobiDBLite consensus disorder prediction 111 126 - -
Glsi14g0620 368 SUPERFAMILY Homeodomain-like 190 258 IPR009057 -
Glsi14g0620 368 ProSitePatterns 'Homeobox' domain signature. 232 255 IPR017970 GO:0000981|GO:0006355
Glsi14g0620 368 CDD bZIP 250 289 - -
Glsi14g0620 368 MobiDBLite consensus disorder prediction 169 205 - -
Glsi14g0620 368 FunFam Homeobox-leucine zipper protein 18 186 262 - -
Glsi14g0620 368 MobiDBLite consensus disorder prediction 45 73 - -
Glsi14g0620 368 MobiDBLite consensus disorder prediction 74 88 - -
Glsi14g0620 368 SMART halz 257 300 IPR003106 GO:0006355|GO:0043565
Glsi14g0620 368 MobiDBLite consensus disorder prediction 1 31 - -
Glsi14g0620 368 CDD homeodomain 201 258 IPR001356 GO:0003677
Glsi14g0620 368 ProSiteProfiles 'Homeobox' domain profile. 197 257 IPR001356 GO:0003677
Glsi14g0620 368 MobiDBLite consensus disorder prediction 44 157 - -
Glsi14g0620 368 Pfam Homeodomain 201 255 IPR001356 GO:0003677
Glsi14g0620 368 Coils Coil 270 293 - -
Glsi14g0620 368 Gene3D - 205 255 - -
Glsi14g0620 368 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 68 338 - -
Glsi14g0620 368 MobiDBLite consensus disorder prediction 322 341 - -
Glsi14g0620 368 SMART HOX_1 199 261 IPR001356 GO:0003677
Glsi14g0620 368 MobiDBLite consensus disorder prediction 173 205 - -
Glsi14g0620 368 MobiDBLite consensus disorder prediction 322 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0620 Glsi-ChrGlsi14 6967272 6968644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0620 186 357 Homeobox Transcription Factor Family AT4G37790 63.429 6.56e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Glsi14g0620 Homeodomain 1.8e-15 CL0123