Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0606 ATGGTTTCTCACATGGAAAAGCAGCAAAACCAGCAAAGGTGGGGGACGTGGGATGAGCTGTTACTCGCGTGCGCCGTCAAGCGCCATGGCTTCAAGGACTGGAACGCCGTCGCCATGGAGGTCCAGAACCGAACCACCCTCCCCCACCTCCTCACCACAGCCCGACACTGCGAGCAGAAATTCCTTGATCTCAAACGCCGATTCACCGCCCAATGCAACGACGGCGTTACGAACCCCCCGGAGAACGGTACCGTCGCCGGCGAAAAGGTCGATCATGTCCCGTGGCTCGACGAATTGAGGAAACTCCGCGTGGCTGAGCTCCAGCGAGAGGTCCAACGCTCCGACGTCTCCATTCTGTCGTTGCAGCTTAAGGTAAAGAGGTTGGAGGAAGAGAGAGAGAAAGGCTCGAAGGAGAAGGACGGAGAACAAGAAGCGAAACCAGATCTGAGCGACTCCGGGAAACAAAAACCACTAAACGACAAAAAAGGCGGTCAAGAAAAAGCTCAAGAACCGGCGACTTCCGAACCGGTGACGAGGCTTGACGACGATCATAATAGTAAGCTTCCAACCGGTGACGAATCCGACCGGGAAAACCAGTCGGTTAATGAGTCCAATTCTACCGGTTCGGTAGGGAAAACCGGGGAGGGAGAAATGAAGACAGAACCGACCCCGGTCCAGGCCGGTCAAAAAAAACCCGACGCGGTCGGGGGGAAGGCCAATCCGGTTGGGGAAGAATCTAATAACGGAAGCTACGATGTGGCGGCAAAAGTGGCAACGTGTGAGTCACTACCACCGAGTGAGGAGAGGAAAGTGGAGGACTCGTCCGAGTTGCGAGACTCGGTGACTCACTCGAGGGATGGCGAGGTTGGGATGAGAGAGAGCAGTGAGGTTCAGAGCTCGGCGAGTTTGACGAAGAAAAGAAAGACGCGTCGGAGGAAGGAGGAGCCGCCGGAGAACGACGACGGGGTCGTGAAATCACAGCCGTTGATTGGCTTGTTGGAGTTAATCAAAGGGCACGAACACAGCTCCGTGTTCGAGCGCCGTCTCGAGAGCCAGGAATCTGACAATTACAAAAACATAGTACGACAACACATGGATTTGGAAACCATACAATGGCGGCTCCGAAATGGCACTTATTCTTGCTGTACTCTAGCTTTCTTCCGTGACCTCCTCCTCCTGTTCACCAACGCTACCGTCTTCTTCCCCCAAGACTCCACCGAATCACGCACTGCACAACAATTGTTTCGCCTTGTCACCGACGAACTCAAGCACCACATTCCGACACGATCGGACCCCCTTCCGAGAAACCCAGATACATTGCCACCAAACCCATCATCACAACCCAAACCCGATTCTCTGCTTTCCAAACACAAAGCAGCTGCTCCCATTTTGGTCTGCCGGAAACGCAGTTCAATCTCAGCTAAATCTTCCACTCCCACCACCTTTGCCCAAAAGGGTGACCAACCAGGCCATGAGAAGAAGCCATCAGCTTCGGATACAAAACCACCATTGAAGCAGCCCTCTTCTTCTGATACTGATGAAGAGCCTCCCAAGGCCAAGGAAAAGCCTGTTACCGGAGCAAGAAGCCTGAGAAGAGGCAATAAAAGCATCAGTGGCAACCCCAGCAAGAAGGCAGGCACAGCCAGCAAGCTAGAGACTCCGAAGTCAGATAAAAGCAAAGCAGAGGGATCGGGATCGGGATCAGGGTCAGGGTCAGGGGTGGCGGCCACGGACAGAAAGAGAAGTGCAGCAGCGGATTTCTTGAAAAGGATAAAGCGAAATGCTCCGGCAACAGAGACATTAAAAAGTGGCAGTAGTGGTGGCGGTAGTAGTAACAGAGGTGGGGTTAGTGGAAAAGACCAGAAGAAGATTATAAACAGTGGAAAGGGGGATAAAGGGAAAGAAAGAACATCCAGGCACGGTGGTGGCTCCTCAGGCGATAAAAAGAATGAGAATGAGAATAGCAGTCAATCAAAGCGAAGTGTAGGGAGGCCTCCTAAGAAGGTAGTAGAAACTAATGCGGCTTCTGCAAAGCGTGGAAGGGAAAGTCGGGGAAAGGATAAACGGCCAAAGAAGCGTTCCAAGAAGTAA 2091 0.5285 MVSHMEKQQNQQRWGTWDELLLACAVKRHGFKDWNAVAMEVQNRTTLPHLLTTARHCEQKFLDLKRRFTAQCNDGVTNPPENGTVAGEKVDHVPWLDELRKLRVAELQREVQRSDVSILSLQLKVKRLEEEREKGSKEKDGEQEAKPDLSDSGKQKPLNDKKGGQEKAQEPATSEPVTRLDDDHNSKLPTGDESDRENQSVNESNSTGSVGKTGEGEMKTEPTPVQAGQKKPDAVGGKANPVGEESNNGSYDVAAKVATCESLPPSEERKVEDSSELRDSVTHSRDGEVGMRESSEVQSSASLTKKRKTRRRKEEPPENDDGVVKSQPLIGLLELIKGHEHSSVFERRLESQESDNYKNIVRQHMDLETIQWRLRNGTYSCCTLAFFRDLLLLFTNATVFFPQDSTESRTAQQLFRLVTDELKHHIPTRSDPLPRNPDTLPPNPSSQPKPDSLLSKHKAAAPILVCRKRSSISAKSSTPTTFAQKGDQPGHEKKPSASDTKPPLKQPSSSDTDEEPPKAKEKPVTGARSLRRGNKSISGNPSKKAGTASKLETPKSDKSKAEGSGSGSGSGSGVAATDRKRSAAADFLKRIKRNAPATETLKSGSSGGGSSNRGGVSGKDQKKIINSGKGDKGKERTSRHGGGSSGDKKNENENSSQSKRSVGRPPKKVVETNAASAKRGRESRGKDKRPKKRSKK 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0606 696 CDD Bromodomain 332 422 - -
Glsi14g0606 696 MobiDBLite consensus disorder prediction 531 549 - -
Glsi14g0606 696 Gene3D - 289 431 IPR036427 GO:0005515
Glsi14g0606 696 MobiDBLite consensus disorder prediction 129 325 - -
Glsi14g0606 696 SMART bromo_6 114 427 IPR001487 GO:0005515
Glsi14g0606 696 MobiDBLite consensus disorder prediction 511 528 - -
Glsi14g0606 696 MobiDBLite consensus disorder prediction 598 617 - -
Glsi14g0606 696 MobiDBLite consensus disorder prediction 582 596 - -
Glsi14g0606 696 Coils Coil 118 145 - -
Glsi14g0606 696 MobiDBLite consensus disorder prediction 560 575 - -
Glsi14g0606 696 MobiDBLite consensus disorder prediction 263 292 - -
Glsi14g0606 696 SUPERFAMILY Bromodomain 320 429 IPR036427 GO:0005515
Glsi14g0606 696 ProSiteProfiles Bromodomain profile. 337 408 IPR001487 GO:0005515
Glsi14g0606 696 MobiDBLite consensus disorder prediction 624 655 - -
Glsi14g0606 696 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 7 696 - -
Glsi14g0606 696 MobiDBLite consensus disorder prediction 470 485 - -
Glsi14g0606 696 MobiDBLite consensus disorder prediction 176 199 - -
Glsi14g0606 696 SUPERFAMILY Homeodomain-like 9 46 IPR009057 -
Glsi14g0606 696 CDD SANT 13 45 IPR001005 -
Glsi14g0606 696 Pfam Myb-like DNA-binding domain 12 46 IPR001005 -
Glsi14g0606 696 MobiDBLite consensus disorder prediction 129 168 - -
Glsi14g0606 696 Pfam Bromodomain 333 412 IPR001487 GO:0005515
Glsi14g0606 696 SMART sant 10 67 IPR001005 -
Glsi14g0606 696 MobiDBLite consensus disorder prediction 434 448 - -
Glsi14g0606 696 MobiDBLite consensus disorder prediction 426 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0606 Glsi-ChrGlsi14 6860535 6864811 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi14g0606 Bromodomain 1.2e-10 No_clan