Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0603 ATGCTGGGAAACTATCAACTACCTGGCTATAAAGAAGACAATCTTTTGTTGAAGTTATCTGCACAAGCTCAGCAAAGTTCTATCCTGCAAAATAGTCAGCATTCTGTTACCATGAATTCCAGTCAGCAGCTTAGCCTATCACTGCTTCATGTGCTATCATTTGGGGTGATATCTCACACTGCAAATATAAGTTTAGGGTCATACTTAGTGGCCTCTAAGGACTCTTCCTCCCGGTTATCACCTTCTGGGGAATTTTCCTTTGACTTTCATGGTACCACCAATGATCAAAATCTTCTTGCTTGCCACCTGAATGACTGCAGCCAATCTTGCCTCTATGATTGCAATCGTGTTGTTGCTGTTGCAAAGGAAGGGACCTCAAGGATATCGAACTTCGGATTGACAAAGCTTCTTTTGAGTGATTCAACACGGACACATACAAATGTTAGAGGGACAAGAGGATATGTCGCCCCAGAAAGGTTCAGGAACACTCCAATTACAGTGAAGATTGATGTTTATAGTTATGGGGTCATGTTGCTAGAAGTTATCTTTTGCAGGAAAAGCCTTGACATGGAAAAAGAAAATGAAGAAGTGATACTGAGTGACTGTGTTTATGAGTGCTATAAAGAAAGAAGACTATGCAAGCTTGTAGTGGATGATCAGGAAGCTAGAAATAACCTGAAAAGGTTGGAAAGGCTAGCGATGGTGGCACTTTGGTGCATACAAGAGGATCCATCTTTGAAACCTTCCATGAAGAAGGTCACAAAGATGCTTGAAGGCGTTGTTGATGTTTCGGTGCACACATGTCCGCCTTCAGTTAATTCAACAAACGTGTTATCTACAAAAATTCACTGCGTGATTTTAAGCTCTAGTTTTCTAAGTTTTCAAACTAAGGGCCAAGGTATCAACAAAAATTCACAGTGCCGTCCATATTATATGAATTAA 942 0.4055 MLGNYQLPGYKEDNLLLKLSAQAQQSSILQNSQHSVTMNSSQQLSLSLLHVLSFGVISHTANISLGSYLVASKDSSSRLSPSGEFSFDFHGTTNDQNLLACHLNDCSQSCLYDCNRVVAVAKEGTSRISNFGLTKLLLSDSTRTHTNVRGTRGYVAPERFRNTPITVKIDVYSYGVMLLEVIFCRKSLDMEKENEEVILSDCVYECYKERRLCKLVVDDQEARNNLKRLERLAMVALWCIQEDPSLKPSMKKVTKMLEGVVDVSVHTCPPSVNSTNVLSTKIHCVILSSSFLSFQTKGQGINKNSQCRPYYMN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0603 313 SUPERFAMILY Protein kinase-like (PK-like) 121 281 IPR011009 -
Glsi14g0603 313 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 125 268 - -
Glsi14g0603 313 ProSiteProfiles Protein kinase domain profile. 1 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0603 313 Gene3D Transferase(Phosphotransferase) domain 1 90 270 - -
Glsi14g0603 313 Pfam Protein kinase domain 122 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0603 Glsi-ChrGlsi14 6847424 6849126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0603 127 297 Receptor kinase-like Gene Family AT1G56120 34.503 1.12e-22 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi14g0603 Pkinase 1.7e-13 CL0016