Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0602 ATGTGGAGATTTAAGCCATTCATGCAAAAAGAGCCAGCTGGGCTTGAAGGACGCTCTATAGATGTTGGCAATCTTAAAATAAATGTTCAGAAGGCCATTGCTGAAGGTGGTTTCTCTTGTGTCTACTTGGCTCGTGATGCTGTACATATGACAAAACAATATGCTTTGAAACACATTATATGCAACGATGAAGAATCCCTTGAATTGGTAAAAAAGGAGATCTCAGTGATGAAATCATTGAAAGGCCATCCCAATGTTGTTACACTATATGCACATACAATCTTGGATATGGGCAGGACAAAAGAGGCATTCCTTGTGATGGAATTCTGTGAAAAGTCTCTGGTGAATGTGCTGGAAAGCCGAGGAGCTGGGTATTTTGATGAGCAACAGGTTTTGTTGATCTTCAGGGATGTATGTAATGCAGTTTTTGCTATGCACTGCCAATACCCACCTATTGCTCACCGAGACTTAAAAGCTGAAAATCTTCTATTAGGTTCAGATGGCTTATGGAAGTTGTGTGATTTTGGAAGCACTTCCACTAATCATAAGCGTTTTGAGAAACCAGAAGAAATGGGGATTGAGGAAGACAATATCAGGAAGCACACTACCCCTGCCTACAGGGCCCCTGAGATGTGGGATCTGTTTCTGAAAGAAATCATTAATGAGAAAGTAGACATATGGGCTCTAGGGTGTCTCCTTTTTCGCATATGCTACTTCAAAAGTGCATTCGATGGAGAGTCAAAGCTGCAAGTCTTAAATGGAAACTATCGCATTCCTGATTTACCTAAATACAGCTCATTTGTTATAGACCTAATCAGAGACACGCTTCAAGCTAGACCAGATGACAGACCAGATATCACACAGGTCTGGTTTCGTGTTAATGAGCAGTTACCTATTAATTTGCAGAAGTCATTACCTGACACACCGCCTGAATTGCCCTCTTCCAACAATCATGAAGGTGCTTCAAGGCTTGCAAATCGATCTCCCCCAATGCCTCATAGGAGTCCTCCTCCCCCACCATCCGGAGAACCTAAAATTACATCACAGCCATCCCTTGCTTCTGGGGGAGGTGGAGGTGGGGGCCCACTTGGTGCTTTCTGGTCCACTCAGCATGCAAAAAATTCACTTGTCACAGATGAAAAAGGCAAACCCATATTTGATGAAGAACCATCTAGCCATCGTAATTCTTCAAAACATGAGAGAATTGGTCTAGACAATAATCAATTACCCAATATTGTTAGCAATAATAAAGTGGCTAATGCACAATCCCAAACTGTGAAAAGCAGTGCGCATGGAAAATCACACAAGCCCGATGCTGGGTCTTCCAAAGACTTTGAAATAAAATTTTTCCAGGGTACAGATAATAGTAGTGAGAGGCGAATGTCATCAAGTATGGAGAACACAGTTACTCTTCAAGATCAGGCTTTTAACACTTTTGTTGCTGAATTTGATACCAGTAAACTTAACTCTGGAATCAATTATAAATCTGATAGGGAAGAAGCATTAGAGGCCGAAGTGCAGAAACTCAAAGAGCAGCTGAAGGAAGCTAACTTGGGGAAATCTGAAATAACTTCCAAGTATGAAAAGCTTACTGCCATCTGCCGATCTCAAAGGCAAGAGTTACAGGATCTCAAGCAAGCACTCACAGCAAGAACTCCACCAAATATGGAGGGTTTGAGAACCCCTTCTGCAGTTGCAACAACTACTGCTATGAGAGAGAAGGTTGGTGGGACAGTTTGGGAACTATCGCAAAATAAAACTGAATGGAAGACTCCTAGTTCAGAACCAAAGTCATGGCAAGCTTTTCCAGAGGAACCCCAGCAACAAAAGTCCCATTCAGCAGACAATACTTCCAAGTCTGTTAGGACTAGGAGTGGTCAGCAAAACAAGAAGCCTCAGCCTTCTCAACTAACTACGGATTTTGATAATTGGGGTTTTGGAACTGATAGTTTTACTGCTATGCACACTAGCAGCCCTCAGATGCCAGTACACGCTAGTGAAGGGAGTAATTCCCAGGCTACCCTTGAGAGCAAGCCAACTTCTCAACCTGCTGGATGGGCTGGTTTTTAG 2070 0.4266 MWRFKPFMQKEPAGLEGRSIDVGNLKINVQKAIAEGGFSCVYLARDAVHMTKQYALKHIICNDEESLELVKKEISVMKSLKGHPNVVTLYAHTILDMGRTKEAFLVMEFCEKSLVNVLESRGAGYFDEQQVLLIFRDVCNAVFAMHCQYPPIAHRDLKAENLLLGSDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKHTTPAYRAPEMWDLFLKEIINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYSSFVIDLIRDTLQARPDDRPDITQVWFRVNEQLPINLQKSLPDTPPELPSSNNHEGASRLANRSPPMPHRSPPPPPSGEPKITSQPSLASGGGGGGGPLGAFWSTQHAKNSLVTDEKGKPIFDEEPSSHRNSSKHERIGLDNNQLPNIVSNNKVANAQSQTVKSSAHGKSHKPDAGSSKDFEIKFFQGTDNSSERRMSSSMENTVTLQDQAFNTFVAEFDTSKLNSGINYKSDREEALEAEVQKLKEQLKEANLGKSEITSKYEKLTAICRSQRQELQDLKQALTARTPPNMEGLRTPSAVATTTAMREKVGGTVWELSQNKTEWKTPSSEPKSWQAFPEEPQQQKSHSADNTSKSVRTRSGQQNKKPQPSQLTTDFDNWGFGTDSFTAMHTSSPQMPVHASEGSNSQATLESKPTSQPAGWAGF 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0602 689 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0602 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Glsi14g0602 689 MobiDBLite consensus disorder prediction 330 345 - -
Glsi14g0602 689 Gene3D Transferase(Phosphotransferase) domain 1 11 306 - -
Glsi14g0602 689 SUPERFAMILY Protein kinase-like (PK-like) 29 342 IPR011009 -
Glsi14g0602 689 MobiDBLite consensus disorder prediction 302 445 - -
Glsi14g0602 689 Coils Coil 492 547 - -
Glsi14g0602 689 CDD STKc_GAK_like 26 298 - -
Glsi14g0602 689 MobiDBLite consensus disorder prediction 580 681 - -
Glsi14g0602 689 MobiDBLite consensus disorder prediction 376 401 - -
Glsi14g0602 689 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0602 689 MobiDBLite consensus disorder prediction 402 430 - -
Glsi14g0602 689 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0602 689 MobiDBLite consensus disorder prediction 579 689 - -
Glsi14g0602 689 FunFam probable serine/threonine-protein kinase DDB_G0280111 10 305 - -
Glsi14g0602 689 PANTHER SERINE/THREONINE PROTEIN KINASE 1 677 - -
Glsi14g0602 689 MobiDBLite consensus disorder prediction 302 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0602 Glsi-ChrGlsi14 6842261 6845474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0602 26 292 CBL-interacting serine-threonine protein kinases AT5G45810 28.622 2.53e-19 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Glsi14g0602 Pkinase 5.3e-39 CL0016