Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0589 ATGAAAACGGGTCAGGTCAACAACCAGCTGATCCGATATTGAAGCAGAGAGGGGATTGCTGCAGTAGCCATGGCGCCGAAGCAGAGAACACGAACGGTGAGCAGAAATCCTGAATTGATCAGGGGTATTGGCAAGTACTCGAGGTCCAAGATGTACCACAAGAGGGGTCTCTGGGCCATCAAGGCTAAAAATGGCGGCGTTTTCCCACACCACGATCCCAAGCCCAAGCCTGAACTACCTGCTGAGAAACCCCCCAAGTTTTACCCGGCTGAAGATGTGAAGAAGCCACTTGTCAATAAGCACAAGCCGAAACCCACTAAACTCAGGGCTAGCATTAGTCCCGGGACTGTGCTGATTCTTCTTGCTGGGAGATTCAAGGGAAAGAGAGTAGTTTTTCTGAAGCAACTTCCTTCTGGGTTGCTTCTTGTGACTGGTCCATTTAAAATTAATGGAGTTCCTTTGAGACGTGTAAACCAATCTTACGTCATTGGCACTTCCACAAAGGTTGATATTTCTGGAGTTAATGTTGATAAATTTGATGACAAGTACTTTGCCAAGGAAGTCGAGAAAAAGAAAAAGAAGGGAGAAGGGGAGTTTTTTGAGGCTGAGAAGGAGGAGAAAAATGTGATTTCACAGGAGAAAAAAGATGACCAGAAAACTGTGGATTCTGCAATGATAAAAGCCATTGAGAATGTTCCAGATTTGAAGGCTTATTTGGGTGCAAGGTTTTCTCTCCAGGCAGGCATGAAGCCTCATGAGCTAGTCTTTTAA 771 0.454 MKTGQVNNQLIRYXSREGIAAVAMAPKQRTRTVSRNPELIRGIGKYSRSKMYHKRGLWAIKAKNGGVFPHHDPKPKPELPAEKPPKFYPAEDVKKPLVNKHKPKPTKLRASISPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFAKEVEKKKKKGEGEFFEAEKEEKNVISQEKKDDQKTVDSAMIKAIENVPDLKAYLGARFSLQAGMKPHELVF 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0589 256 Pfam Ribosomal protein L6, N-terminal domain 26 84 IPR005568 GO:0003735|GO:0005840|GO:0006412
Glsi14g0589 256 Pfam Ribosomal protein L6e 149 256 IPR000915 GO:0003735|GO:0005840|GO:0006412
Glsi14g0589 256 Gene3D - 110 194 IPR014722 -
Glsi14g0589 256 MobiDBLite consensus disorder prediction 68 106 - -
Glsi14g0589 256 MobiDBLite consensus disorder prediction 68 99 - -
Glsi14g0589 256 SUPERFAMILY Translation proteins SH3-like domain 110 200 IPR008991 -
Glsi14g0589 256 FunFam 60S ribosomal protein L6 110 194 - -
Glsi14g0589 256 Coils Coil 185 205 - -
Glsi14g0589 256 CDD KOW_RPL6 104 256 IPR041997 -
Glsi14g0589 256 PANTHER 60S RIBOSOMAL PROTEIN L6 29 256 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0589 Glsi-ChrGlsi14 6759253 6761052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0589 24 256 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 81.974 9.70e-123 347