Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0586 ATGACTGTTGGAGATGTTTTTACTTTGAAGAATCGATTACCATTGGGAGCGATGAATACATATTGGGGCATAGCTAGATCCATTCATGGCACGGCATCATTGGCGAGAGACTATTATGATGTTCTTGGAGTGAGTAAGAATGCGAGCGCGTCTGAAATAAAGAAAGCATACTATGGGCTTGCAAAGAAGCTCCATCCAGACACAAACAAAGAGGATCCTGAGGCTGACAGAAAGTTTCAAGAAGTTTCAATAGCATATGAGGTTTTGAAGGATGAGGAGAAGCGTCAACAGTATGATCAGGTTGGCCATGATGCCTTTGTAAACCAACAAAGCACTGGGTTTGGAGGTGATGCTGGTGGCTTTAATCCATTTGAGCAGATATTCCGTGACCATGATTTTGTCAGGAGCTTTTTTCATCAGAATGTTGGTGGAGAGGATGTCAAGGTCTTTGTTGAACTATCATTTATGGAAGCTGTCCAAGGATGCACCAAAACTGTAACATTTCCAGCTGAGGTGCTTTGTAATGCTTGTGGTGGAAGTGGCGTTCCTCCTGGAACAAGACCTGAAACATGTAAACGCTGTAAAGGGTCAGGCGTGACATTTGTACAAGCTGGCATATTCAGGATGGAAAGTACTTGTGGTACATGCAAGGGAACTGGAAAAATTGTATCGAGCTTCTGCAAGTCTTGCGGGGGTGCAAAGGTTATCAAAGGAACAAAGTCGGTCAAGTTGGATTTCGTGCCTGGGATAGACAACAACGAGACCATAAAGGTTTCCAGAAGTGGTGGAGCAGATCCTGATGGAGGTCAGCCGGGTGATCTTTATGTTACTGTCAAGGTTAGGGAAGACCCGGTTTTCCGGAGAGAAGGATCTGATATTCATGTTGATACTGTTTTAAGTATTACTCAGGCAATTTTGGGTGGAACCATTCAGGTCCCAACTCTTACTGGAGATGTTGTTCTTAAGGTTCGTCCTGGCACCCAACCTGGTCAGAAGGTGGTTCTGAAAAAGAAAGGGATCAAGACAAAAAATTCATATACATTTGGGGATCAATTTGTTCATTTTAATGTCAGCATTCCAACAAACCTGACACAGAGACAACGTGAATTGATCGAAGAGTTTGCCAAGGAAGAACAAGGGGAATATGATAAACAAAGAGCTGCATCAGGTTCTGGATGA 1179 0.4334 MTVGDVFTLKNRLPLGAMNTYWGIARSIHGTASLARDYYDVLGVSKNASASEIKKAYYGLAKKLHPDTNKEDPEADRKFQEVSIAYEVLKDEEKRQQYDQVGHDAFVNQQSTGFGGDAGGFNPFEQIFRDHDFVRSFFHQNVGGEDVKVFVELSFMEAVQGCTKTVTFPAEVLCNACGGSGVPPGTRPETCKRCKGSGVTFVQAGIFRMESTCGTCKGTGKIVSSFCKSCGGAKVIKGTKSVKLDFVPGIDNNETIKVSRSGGADPDGGQPGDLYVTVKVREDPVFRREGSDIHVDTVLSITQAILGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKKKGIKTKNSYTFGDQFVHFNVSIPTNLTQRQRELIEEFAKEEQGEYDKQRAASGSG 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0586 392 FunFam Chaperone protein dnaJ 1, mitochondrial 281 387 - -
Glsi14g0586 392 SMART dnaj_3 36 94 IPR001623 -
Glsi14g0586 392 Gene3D DnaJ domain 34 146 IPR036869 -
Glsi14g0586 392 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 31 383 - -
Glsi14g0586 392 SUPERFAMILY Chaperone J-domain 36 140 IPR036869 -
Glsi14g0586 392 Pfam DnaJ domain 37 99 IPR001623 -
Glsi14g0586 392 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 161 236 IPR036410 -
Glsi14g0586 392 CDD DnaJ_zf 174 234 IPR001305 GO:0031072|GO:0051082
Glsi14g0586 392 CDD DnaJ 37 91 IPR001623 -
Glsi14g0586 392 Hamap Chaperone protein DnaJ [dnaJ]. 34 388 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Glsi14g0586 392 ProSiteProfiles dnaJ domain profile. 37 102 IPR001623 -
Glsi14g0586 392 Pfam DnaJ C terminal domain 148 360 IPR002939 -
Glsi14g0586 392 ProSiteProfiles Zinc finger CR-type profile. 161 239 IPR001305 GO:0031072|GO:0051082
Glsi14g0586 392 Gene3D - 174 234 - -
Glsi14g0586 392 Gene3D - 147 276 - -
Glsi14g0586 392 FunFam Chaperone protein dnaJ GFA2, mitochondrial 34 146 - -
Glsi14g0586 392 Pfam DnaJ central domain 174 234 IPR001305 GO:0031072|GO:0051082
Glsi14g0586 392 CDD DnaJ_C 145 363 - -
Glsi14g0586 392 Gene3D - 281 389 - -
Glsi14g0586 392 FunFam Molecular chaperone DnaJ 166 239 - -
Glsi14g0586 392 SUPERFAMILY HSP40/DnaJ peptide-binding domain 285 371 IPR008971 GO:0006457|GO:0051082
Glsi14g0586 392 PRINTS DnaJ domain signature 94 113 IPR001623 -
Glsi14g0586 392 PRINTS DnaJ domain signature 57 72 IPR001623 -
Glsi14g0586 392 PRINTS DnaJ domain signature 74 94 IPR001623 -
Glsi14g0586 392 PRINTS DnaJ domain signature 39 57 IPR001623 -
Glsi14g0586 392 ProSitePatterns Nt-dnaJ domain signature. 79 98 IPR018253 -
Glsi14g0586 392 SUPERFAMILY HSP40/DnaJ peptide-binding domain 144 283 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0586 Glsi-ChrGlsi14 6743099 6751043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0586 30 99 C2H2 Transcription Factor Family AT1G74250 41.333 8.12e-08 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0586 14 6743099 6751043 Glsi14g0586 14 6743099 6751043 ECH