Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0560 ATGGCATTGTCTGGACGAATCAGATCGAGCATCTCTCTCTTCAAAAATTTTGGGTATCTGACCTCTGATTCTCTCTCTGCCCAGAGATCCACACTTCCCCGACTCATCAACGCCCCTGCCAATTCCCTGGCCTCAAGAAATTATGCCACCACAACTGGGGCGAAGGAACAGAAAGTTAAGGTGCCTCTTGTTTTGTTTGGGGGTTCAGGAAACTATGCCTCTGCTTTGTACATTGCAGCAGTAAAAGCTAATGTTTTGGAAAAGGTTGAGTCTGAGGTTATTGACCTTGTTGAGGCGACAAAGAGAAGTCCCAAATTTTCTGAGTTTACTAAGGACGTGTCTGTGCCCAAAGATACTAGAGTAAAGGCTATCCAGGCTATTTGTGGTGAAGCTAAATTTACAGATATTACAAAGAACTTCCTTGTTGTGTTAGCTGAAAATGGGAGGCTACGACACATAGATAGTATAGCAAAGAGGTTTGCAGAGTTGACTATGGCACATAAGGGAGAAGTGAAAGCCATTGTGACCACTGTCCTTCCTCTTCCTCCGCAAGAGGAGAAGGAACTGAAGGAGACTCTTCAGGCGGTCATAGGAGCTGGGAAAACGGTTCATCTTGAACAGAAGATTGATCCAAGCATACTTGGTGGTCTAGTGGTAGAGTTTAGCCAGAAGGTCTTTGACATGTCCATTAAGACTAGGGCGCGCCAGATGGAGAGGTTCCTCAGAGAACCTGTAAGCATTGCCGATATCTAG 753 0.4542 MALSGRIRSSISLFKNFGYLTSDSLSAQRSTLPRLINAPANSLASRNYATTTGAKEQKVKVPLVLFGGSGNYASALYIAAVKANVLEKVESEVIDLVEATKRSPKFSEFTKDVSVPKDTRVKAIQAICGEAKFTDITKNFLVVLAENGRLRHIDSIAKRFAELTMAHKGEVKAIVTTVLPLPPQEEKELKETLQAVIGAGKTVHLEQKIDPSILGGLVVEFSQKVFDMSIKTRARQMERFLREPVSIADI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0560 250 Gene3D - 68 161 IPR026015 -
Glsi14g0560 250 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 203 222 IPR020781 GO:0015986|GO:0016020|GO:0046933
Glsi14g0560 250 Pfam ATP synthase delta (OSCP) subunit 70 239 IPR000711 GO:0015986|GO:0046933
Glsi14g0560 250 Hamap ATP synthase subunit delta [atpD]. 64 243 IPR000711 GO:0015986|GO:0046933
Glsi14g0560 250 PRINTS ATP synthase delta subunit signature 216 234 IPR000711 GO:0015986|GO:0046933
Glsi14g0560 250 PRINTS ATP synthase delta subunit signature 138 149 IPR000711 GO:0015986|GO:0046933
Glsi14g0560 250 PRINTS ATP synthase delta subunit signature 149 163 IPR000711 GO:0015986|GO:0046933
Glsi14g0560 250 PRINTS ATP synthase delta subunit signature 201 216 IPR000711 GO:0015986|GO:0046933
Glsi14g0560 250 PRINTS ATP synthase delta subunit signature 68 87 IPR000711 GO:0015986|GO:0046933
Glsi14g0560 250 PANTHER ATP SYNTHASE DELTA CHAIN 44 243 IPR000711 GO:0015986|GO:0046933
Glsi14g0560 250 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 69 170 IPR026015 -
Glsi14g0560 250 NCBIfam ATP synthase F1 subunit delta 71 240 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0560 Glsi-ChrGlsi14 6558982 6562847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0560 108 250 Primary Pumps ATPases AT5G13450 64.336 7.29e-66 201