Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0516 ATGGCCCTCAAGCTCACCCGATACTCTTACGCTGAAATTAAGAGAATCACCAATCGGTTTGAGGAAAGGTTAGGCGAGGGGGCTTATGATACTGTGTTCAAAGGAGAGATTTCAAGTCAGTTCACAGTTGCAGTGAAAATCCTCACTAGTTCCCAAGGAAACGAGGAAGACTTCTTTAATGAAGTTAGAGCAATGGGCAGAACTAATCATGTTAACATTAAGTCTTCTATTGGAAATTTGGAAATGTATCTTACAATGTTGCTTGAAACAATCGGGGAAGGAAGATCACAGAGGACACAGGGTAGTAAAGCTGAATTGAGATTCTCAAATGCCGCATCATGTCTTGATCAAATTTGCAACTTCAAGGTCCCACATGACTACTATGCTCGAGAACTTTGGTTCCGACACTACCATTTGATTAAGATACCCCCATTAATACGTTCTGCAAAACTCATTCCAATTCTCAAAGATATGGCTTCTGCACAAATAACTTTGCAGACTCAACCTCTTTTAGATCTAATGCTACGAATTCCTTCGGGTAGTCATGTCAAAACACGACAAGAATGGATGCTGAATTCCTCCAGTGAAGTGAGATTTTCTATTGACTTTGAAAGTGATGTCAAAACAGGGCATCCTACGAGTTCAAGCATTCTTAGTGATGTTGAACTATATCTGCAAGTGTTTGACGATAACAAGTTACAATCTGTTTTGGATACAATAAGGCATCCCGGTGAACCTTATGGCACTGAGGGAGGCGATGAAGATGCTTTAAAATCACTTTCAGCCATAAAATTAACTGAGAGCCAGTCTAAAGAATCATTTGCTACCAAGATAGTGTAG 840 0.4 MALKLTRYSYAEIKRITNRFEERLGEGAYDTVFKGEISSQFTVAVKILTSSQGNEEDFFNEVRAMGRTNHVNIKSSIGNLEMYLTMLLETIGEGRSQRTQGSKAELRFSNAASCLDQICNFKVPHDYYARELWFRHYHLIKIPPLIRSAKLIPILKDMASAQITLQTQPLLDLMLRIPSGSHVKTRQEWMLNSSSEVRFSIDFESDVKTGHPTSSSILSDVELYLQVFDDNKLQSVLDTIRHPGEPYGTEGGDEDALKSLSAIKLTESQSKESFATKIV 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0516 279 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 78 IPR045874 GO:0004672
Glsi14g0516 279 SUPERFAMILY Protein kinase-like (PK-like) 5 80 IPR011009 -
Glsi14g0516 279 Gene3D Phosphorylase Kinase; domain 1 1 88 - -
Glsi14g0516 279 Pfam Protein tyrosine and serine/threonine kinase 20 95 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0516 Glsi-ChrGlsi14 6163004 6172386 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0516 3 78 Receptor kinase-like Gene Family AT1G66980 48.684 9.00e-18 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Glsi14g0516 PK_Tyr_Ser-Thr 3.9e-08 CL0016