LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi14g0471	ATGGGGTATCTCTCTTGCAGAGCCGAATCTGCCGTCTCAACATCCAATTCTCTATCCCCATCTTCCTCCAATGCTTCCGCTCACAAACCAGAGAAGCCCATCAAGATCCAGCAGTTTGACTACAGTGACCTTGAAGCAGCCACCAATGGCTTCTCCGACCGGAAGCTTCTAGGCAAAGGCAGCCATGGGTATGTCTACAAAGCCGTTCTTCGTGGCCGTCCCGTCGCAGTTAAGAGGCCATCTAGAGCTCAGAATGTTGTTCGTCGACCCAGTTCTTCTTCTTCCTCTGTACCGGAAATTACCACCGAGGTCGAGAACGAAATCGACATCTTATCCAAAATTCAGAGCCCGAGATTGGTCAATTTGGTGGGGTTCACGAATGATTCAAAAGACAGGCTTCTGGTTGTGGAATTCATGAGCAACGGAACCCTCTACGATGTTCTTCATTCCTCTGCTCGGCCACCCAATTGGGGTCGAAGAATTCGATTAGCTTTACAAACTGCTAAGGCCATTGATACCCTCCATTCTTCAACCCCACCTGTAATTCACAGAGACATCAAATCTGCTAATGTTCTAATCGACCGCAACTACAATGCCCGACTAGGTGATTTTGGGTTAGCCTTGCGTGGCCATGTGGATGACTATAGAATCAGGTCCACGCCACCAGCAGGAACCATGGGGTATCTTGATCCTTGCTATGTGACCCCAGATAATTTGAGCACAAAAACTGATGTATTTAGCTTTGGGATTTTGTTATTAGAGATCATTAGTGGAAGAAAGGCAATTGATATTACATATTCACCTCCTTCTATTGTGGATTGGGCTATTCCTCTCATAAAGAAAGGGAAGCTTTTGGCTGTTTACGATCCCAGAATATCACCTCCTAAGGATCCAATAGTGAGGAAGCAGTTGGCAGTGATTGCAGCAAAATGTGTAAGGTCTTGCAGAGAGAGAAGGCCTTCAATGAAGGAGATAGTTGCTTGGCTTAGTGGGTTGTGTAAATTGGTACCTCTTCATTCCTGGAATGGTTTTAACAATCCCTGCATGATGATTGAGACTGTGGGACGCCCAGTTGAAGCAAGAAATACCCAATTGAGTCCAAGACAAGGTCTAGAAGGAAGAAGTCTTAATGCCTTGGATGCTAGATTGTCCAAGTCTGCATCCAGATATTCCAGGAGAGTGTATTCTGATTTGGGGTTCAGCAGCAACTTGATGGACCTTATGGCTAGCACTGAGGAGCCAGAATTTCTAAGAGATGATACTGATGGAGCTGAACTTCGCTCTAAATCCGCTAACCAAGCTTCTAGCTCAAGGTTTGGTAGTGGAAGATATTTTACAAGAGGAATAAATCTTTATAGGGCATGTGGTACAGAAAAAGATGCTTTTGGTTTGAGTGAAGGCCAAATTGTTGGCGGGAACCCAAATTTTTGTTCAAAACAAGAAGGGGTTGCTGGTTCAGATTTGAATTCTCAGGTAGTTGAAGCTATCTAG	1491	0.45	MGYLSCRAESAVSTSNSLSPSSSNASAHKPEKPIKIQQFDYSDLEAATNGFSDRKLLGKGSHGYVYKAVLRGRPVAVKRPSRAQNVVRRPSSSSSSVPEITTEVENEIDILSKIQSPRLVNLVGFTNDSKDRLLVVEFMSNGTLYDVLHSSARPPNWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRNYNARLGDFGLALRGHVDDYRIRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEIISGRKAIDITYSPPSIVDWAIPLIKKGKLLAVYDPRISPPKDPIVRKQLAVIAAKCVRSCRERRPSMKEIVAWLSGLCKLVPLHSWNGFNNPCMMIETVGRPVEARNTQLSPRQGLEGRSLNALDARLSKSASRYSRRVYSDLGFSSNLMDLMASTEEPEFLRDDTDGAELRSKSANQASSSRFGSGRYFTRGINLYRACGTEKDAFGLSEGQIVGGNPNFCSKQEGVAGSDLNSQVVEAI	496

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi14g0471	496	ProSitePatterns	Protein kinases ATP-binding region signature.	57	78	IPR017441	GO:0005524
	Glsi14g0471	496	SMART	serkin_6	51	329	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Glsi14g0471	496	SUPERFAMILY	Protein kinase-like (PK-like)	29	329	IPR011009	-
	Glsi14g0471	496	Gene3D	Phosphorylase Kinase; domain 1	22	138	-	-
	Glsi14g0471	496	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	181	193	IPR008271	GO:0004672\|GO:0006468
	Glsi14g0471	496	PANTHER	OS01G0253100 PROTEIN	22	332	-	-
	Glsi14g0471	496	ProSiteProfiles	Protein kinase domain profile.	51	342	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Glsi14g0471	496	FunFam	Serine/threonine-protein kinase-like protein	139	342	-	-
	Glsi14g0471	496	Pfam	Protein tyrosine and serine/threonine kinase	55	327	IPR001245	GO:0004672\|GO:0006468
	Glsi14g0471	496	FunFam	Serine/threonine-protein kinase-like protein At1g28390	21	138	-	-
	Glsi14g0471	496	MobiDBLite	consensus disorder prediction	8	28	-	-
	Glsi14g0471	496	Gene3D	Transferase(Phosphotransferase) domain 1	139	337	-	-
	Glsi14g0471	496	MobiDBLite	consensus disorder prediction	1	32	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi14g0471	Glsi-ChrGlsi14	5842835	5844325	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi14g0471	39	329	Receptor kinase-like Gene Family	AT3G59420	44.444	1.22e-74	251

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CR4L	Glsi14g0471		PK_Tyr_Ser-Thr	1.1e-37	CL0016