Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0465 ATGGATGAAGGAGATGTTGAGCTTCCAGATAATGTCCTATTGTCCAATCTGGAGTCATCTGGCAATGTTCAGGCTTCAACATCCGTGAATAAAATTAGTGAATTCTTGAGGAACACCCAAACCTGCACCCACACTCACACTTGCAACCCTCCTGGTCCGGATGCAGCACATACTCATACATGCTATCACACACATACACAAGTTTTTGCATCTGAAGAAGATGATGATCACCCAGATGATAAAGAGCATACCAACTCGAAACCGAAACGGAATTCAGGTAATAGAGAAGCAGTTCGAAAATATAGGGAGAAGAAGAAGGCACACACAGCTTACTTGGAGGAGGAAGTTAAGAAATTGCGTCTGCTGAATCAGCAGCTAGTCAGGAAACTACAGGGGCAGGCGCTTCTTGAAGCTGAGGTTTTGAGGTTGAGGAGCATCTTGGTAGATCTCAAGGGAAAAATTGACAATGAGTTGGGTGTTTTCCCCTTTCAAAAGCAGTGTAACTCTTCTACTATTTTCAAGGAAGGGCATACCGATCTGCTTTCCTCTGGCCTTGCAACTGGTATTCAGTGTCAGACCAATTTCCCGTGCTCCGATCCACATGCAGGATCATCATCTCAGGTTGATATTTGTGGAAATGGAAAATTGATGGTTCCCTTGGAAAGAAACTGTCAACCTCCAGCTGTCGATTGTCAGGTAAACACAAATAACATGGAAAATACAGAGGGACAAATTACGGACGCGATGGATAACTTGATGTCATCTGCATCTCGAGCCCAGTAA 783 0.4406 MDEGDVELPDNVLLSNLESSGNVQASTSVNKISEFLRNTQTCTHTHTCNPPGPDAAHTHTCYHTHTQVFASEEDDDHPDDKEHTNSKPKRNSGNREAVRKYREKKKAHTAYLEEEVKKLRLLNQQLVRKLQGQALLEAEVLRLRSILVDLKGKIDNELGVFPFQKQCNSSTIFKEGHTDLLSSGLATGIQCQTNFPCSDPHAGSSSQVDICGNGKLMVPLERNCQPPAVDCQVNTNNMENTEGQITDAMDNLMSSASRAQ 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0465 260 PANTHER CCAAT/ENHANCER BINDING PROTEIN 34 162 IPR031106 GO:0003700|GO:0006351
Glsi14g0465 260 SUPERFAMILY Leucine zipper domain 89 131 IPR046347 GO:0003700|GO:0006355
Glsi14g0465 260 SMART brlzneu 85 149 IPR004827 GO:0003700|GO:0006355
Glsi14g0465 260 MobiDBLite consensus disorder prediction 71 100 - -
Glsi14g0465 260 Gene3D - 73 151 - -
Glsi14g0465 260 CDD bZIP 94 140 - -
Glsi14g0465 260 MobiDBLite consensus disorder prediction 71 104 - -
Glsi14g0465 260 Pfam Basic region leucine zipper 87 139 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0465 Glsi-ChrGlsi14 5763979 5764761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0465 37 200 bZIP Transcription Factor Family AT3G51960 51.462 9.75e-54 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi14g0465 bZIP_2 9.2e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0465 14 5763979 5764761 Glsi14g0465 14 5763979 5764761 ECH