Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0460 ATGGAGAAGTACCTCAGAGACAACTTCGACGTCCAGCCCAAGCGGCCGTCGGAGGCAACCCTCCGCCGTTGGAGATCCGCCGTATCCGTCGTCAAGAACCCCCGACGACGTTTTCGCATGGTCGCAGATCTAGTCAAACGCGCCGAGGCCGAGAAGAAGCGCAAGAAAATCCAGGAAAAAATACGAGTAGCGCTCTACGTGCAAAAGGCAGCGTTACATTTTATTGATGCTGGGAAGAGTCGCGCGTCCACTCTCTCCGAAGAGGTTAGAGAAGCTGGTTTTGGAATTGAGCCCGATGAATTAGCTTCCATTGTTCGATCTCATGATAACAAAGGTTTAAAACATTATGGAGGAGTGGGAGGATTAGCAAGAGAAGTTAATGTGTCATTGAAAGATGGAGTTAGTTCACGCGATGTTCCTCGTAGACAAAATATCTATGGATTTAACCACTTTGCTGAGAAGCCGTCAAGAAGTTTTTGGATGTTCGTTTGGGATGCAATGCAAGATTTAACTCTAAATATTCTTATGGTATGTGCAGTTATTTCAGTAGGTGTTGGAATCTCAACTGAAGGTTGGCCAAAAGGTATGTATGATGGAGTGGGAATCACACTCTGTATTCTTTTAATAATCTTTGTCACTTCAATTAGTGACTATAAACAGTCTTTGCAATTTAAGGATTTGGAAAATGAGAAGAAAAATGTAACCATTCAAGTCACTAGAGATGGGAACAGACAAAAGATTTCTATTCATGATTTGACGGTAGGAGATATTGTTCATTTATCAATTGGAGACGTAGTTCCTGCAGATGGGTTATTAATATCAGGTTATAGCTTACTAATTGATGAATCAAGCTTATCAGGCGAGAGTGAGGCAGTGAATGTAGACGAACTGAAGCCTTTTCTATTAGCCGGTACCACAGTACAAGATGGGTCTGCTAAGATGCTAGTGACTTCTGTTGGTATGAGGACAGAATGGGGAAGATTGATGGATACTCTGATCGAAGGGGGAGATGATGAGACACCTTTGCAGGTCAAATTAAATGGGGTTGCGACAATTATTGGAAAGATAGGCTTGGGTTTTGCCCTCCTGACATTCTTGGTTCTGACTGGCAGGTTTTTAGTGGAAAAAATAGTTCATCATGAGATCAATGACTGGTCTTTACAAGATGCATCAAAGCTTCTCAATTTCTTTGCTACTGCTGTAATAATAATAGTTGTGGCAGTTCCAGAGGGGCTGCCTCTGGCAGTGACGCTAAGCCTTGCCTTTGCAATGAAAAAATTAATGAACGACAAGGCACTTGTCAGGCATCTCTCTGCATGCGAGACGATGGGTTCAGCTGGTTGTATTTGTACTGATAAAACAGGGACTTTGACAACAAATCATATGGTTGTAGACAAAATATGGATTTGTGAACAAACTAAGGCAATAAAAAGCAACAACGGGGAAAATGAGTTGAAGTCGTCAATTTCTGAACAACTATTTGACCTCCTTTTGCAGTCTATATTTAAGAATACTAGCTCAGAAGTAGTCAAAGACGAAGATGGAAAGAAAAAGGTCATGGGTACTCCGACAGAGACGGCATTACTGGAATTTGGCCTGCTATTGGGAGGTGATTCTGAGGCTTATAATGAGAAATATAAGATAATAAAGATTGAACCTTTCAATTCAAACAGAAAGAAGATGTCGGTGCTTGTGGCTCTTCCCGGTGGGACCAATAAATCTCGAGCATTCTGTAAAGGAGCATCAGAAATGGTTCTGGAAATGTGTGACAAAGTTGCTGATGCAGATGGCAAAGTCGTCCGTCTGTTCGAAGAACAAAGAAAGAAAATCACAAAAGTTATCGAGGATTTGGCTTCTGAAGCTTTGAGAACTCTCTGCATCGCCTTTAAGGATATAGAAGGACCTTCTAATGGTGATAGTATTCCTGAGGATAATTATACATTATTAGCTATTATTGGCATCAAGGATCCCGTGAGGCCTGGCGTAAAAGAAGCTGTTAAGACCTGTTTAGCAGCTGGGATTACTGTGAGGATGGTAACTGGTGATAACATAATTACTGCTAAAGCAATAGCCAGAGAATGTGGCATCTTGACAGATGGATTGGCTATAGAAGGACCAGATTTCCGCAAAAAGACCCAGCAGGAGATGGAGGAGATAATACCAAAAATACAGGTAATGGCTCGATCCTTGCCTCTAGACAAGCACACCTTAGTAACCCATTTGAGGAAAGACTTTAACGAAGTTGTTGCAGTAACTGGTGATGGGACCAATGATGCTCCAGCATTGCGTGAGGCCGATATTGGACTTGCTATGGGCATAGCAGGAACAGAGGTTGCAAAAGAAAACGCGGATGTCATTGTAATGGATGATAACTTTGCAACCATAATGAATGTTGCCAGATGGGGCCGTTCTGTCTACATCAATATCCAGAAGTTCGTTCAGTTCCAATTAACAGTTAATGTTGTAGCTCTCGTGCTCAATTTTGTTTCCGCATGCCTGTCAGGCTCTGCTCCTCTTACTGCTGTTCAAATGCTTTGGGTAAACATGATCATGGACACTCTTGGTGCTTTGGCACTGGCTACAGAACCTCCCCATGATGGGCTGATGAAAAGGCCACCTACCGGAAGGAATGCCAAATTCATCACCGGGATCATGTGGAGGAATATAATTGGTCAGAGCATCTACCAAATTATTGTGCTTTTGGTTCTCAAATTTCGGGGTAAACAGATCTTGAAGCTCAATGGACCTGACGCTACCACTGTTCTGAATACTGTCATATTCAACGCCTTTGTATTTTGCCAGGTATTCAACGAGATAAACAGTCGTGATATGGAGAAGATCAATGTTTTCCGAGGCATGTTCAGCAGCTGGGTTTTCCTGATGGTCATAGCCATTACGATAAGTTTTCAAGCCATAATAGTTGAATTTCTGGGTGACTTTGCTCAAACAGTGCCATTGAGTGGGGAGTTGTGGCTGACCAGCGTCTTGATTGGTGCAGTAAGTTTACTAGTAGCTGTTGTCCTCAAGTTCATTCCGGTTCCAGTGACTACTCACATCACCAAGCACCACTGTGATTACGAGCCCCTCCCCAGTGGCCCAGAGCTGGCATGA 3111 0.4288 MEKYLRDNFDVQPKRPSEATLRRWRSAVSVVKNPRRRFRMVADLVKRAEAEKKRKKIQEKIRVALYVQKAALHFIDAGKSRASTLSEEVREAGFGIEPDELASIVRSHDNKGLKHYGGVGGLAREVNVSLKDGVSSRDVPRRQNIYGFNHFAEKPSRSFWMFVWDAMQDLTLNILMVCAVISVGVGISTEGWPKGMYDGVGITLCILLIIFVTSISDYKQSLQFKDLENEKKNVTIQVTRDGNRQKISIHDLTVGDIVHLSIGDVVPADGLLISGYSLLIDESSLSGESEAVNVDELKPFLLAGTTVQDGSAKMLVTSVGMRTEWGRLMDTLIEGGDDETPLQVKLNGVATIIGKIGLGFALLTFLVLTGRFLVEKIVHHEINDWSLQDASKLLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGCICTDKTGTLTTNHMVVDKIWICEQTKAIKSNNGENELKSSISEQLFDLLLQSIFKNTSSEVVKDEDGKKKVMGTPTETALLEFGLLLGGDSEAYNEKYKIIKIEPFNSNRKKMSVLVALPGGTNKSRAFCKGASEMVLEMCDKVADADGKVVRLFEEQRKKITKVIEDLASEALRTLCIAFKDIEGPSNGDSIPEDNYTLLAIIGIKDPVRPGVKEAVKTCLAAGITVRMVTGDNIITAKAIARECGILTDGLAIEGPDFRKKTQQEMEEIIPKIQVMARSLPLDKHTLVTHLRKDFNEVVAVTGDGTNDAPALREADIGLAMGIAGTEVAKENADVIVMDDNFATIMNVARWGRSVYINIQKFVQFQLTVNVVALVLNFVSACLSGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPTGRNAKFITGIMWRNIIGQSIYQIIVLLVLKFRGKQILKLNGPDATTVLNTVIFNAFVFCQVFNEINSRDMEKINVFRGMFSSWVFLMVIAITISFQAIIVEFLGDFAQTVPLSGELWLTSVLIGAVSLLVAVVLKFIPVPVTTHITKHHCDYEPLPSGPELA 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0460 1036 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 662 IPR023299 GO:0000166
Glsi14g0460 1036 Gene3D - 460 657 IPR023299 GO:0000166
Glsi14g0460 1036 SUPERFAMILY Calcium ATPase, transduction domain A 234 331 IPR008250 -
Glsi14g0460 1036 PANTHER CATION TRANSPORTING ATPASE 78 1013 - -
Glsi14g0460 1036 Pfam Cation transporting ATPase, C-terminus 837 1011 IPR006068 -
Glsi14g0460 1036 FunFam Calcium-transporting ATPase 769 1015 - -
Glsi14g0460 1036 NCBIfam calcium-translocating P-type ATPase, PMCA-type 109 1013 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Glsi14g0460 1036 PRINTS H+-transporting ATPase (proton pump) signature 752 768 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi14g0460 1036 PRINTS H+-transporting ATPase (proton pump) signature 610 628 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi14g0460 1036 PRINTS H+-transporting ATPase (proton pump) signature 784 809 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi14g0460 1036 SMART Cation_ATPase_N_a_2 113 187 IPR004014 -
Glsi14g0460 1036 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Glsi14g0460 1036 NCBIfam HAD-IC family P-type ATPase 202 502 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi14g0460 1036 NCBIfam HAD-IC family P-type ATPase 717 839 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi14g0460 1036 NCBIfam HAD-IC family P-type ATPase 547 698 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi14g0460 1036 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Glsi14g0460 1036 SFLD p-type atpase 432 804 IPR044492 -
Glsi14g0460 1036 SUPERFAMILY HAD-like 449 857 IPR036412 -
Glsi14g0460 1036 Pfam haloacid dehalogenase-like hydrolase 448 766 - -
Glsi14g0460 1036 FunFam Calcium-transporting ATPase 650 797 - -
Glsi14g0460 1036 SUPERFAMILY Calcium ATPase, transmembrane domain M 115 1013 IPR023298 -
Glsi14g0460 1036 Gene3D - 165 1011 - -
Glsi14g0460 1036 Gene3D - 447 797 IPR023214 -
Glsi14g0460 1036 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Glsi14g0460 1036 PRINTS P-type cation-transporting ATPase superfamily signature 752 771 - -
Glsi14g0460 1036 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Glsi14g0460 1036 PRINTS P-type cation-transporting ATPase superfamily signature 776 788 - -
Glsi14g0460 1036 PRINTS P-type cation-transporting ATPase superfamily signature 672 682 - -
Glsi14g0460 1036 PRINTS P-type cation-transporting ATPase superfamily signature 650 661 - -
Glsi14g0460 1036 Coils Coil 600 620 - -
Glsi14g0460 1036 CDD P-type_ATPase_Ca_PMCA-like 141 885 - -
Glsi14g0460 1036 Gene3D - 16 77 - -
Glsi14g0460 1036 Pfam Cation transporter/ATPase, N-terminus 115 182 IPR004014 -
Glsi14g0460 1036 FunFam Calcium-transporting ATPase 212 333 - -
Glsi14g0460 1036 FunFam Calcium-transporting ATPase 16 76 - -
Glsi14g0460 1036 FunFam Calcium-transporting ATPase 460 657 - -
Glsi14g0460 1036 Pfam E1-E2 ATPase 235 428 - -
Glsi14g0460 1036 SFLD Haloacid Dehalogenase 432 804 - -
Glsi14g0460 1036 Gene3D - 133 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0460 Glsi-ChrGlsi14 5713412 5720430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0460 57 1033 Primary Pumps ATPases AT3G57330 69.530 0.0 1388