Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0442 ATGATTAAGAAGAGCGATAGTTCAGGTTCAGCTTCAACATGCCAGTGGCTTACACAGATGAAATGGGAAAACAGGGGCATATATCTTGCCCGTCTTCTGCCTACCTGTGCTAAGTACACTGAAGCTGGCAACATCAATAATGCAGGTACTGGACTTAAGAACATTGCCACCCTTGCCTCCCCTGATGGTGATGCTTTGCAGAGGGTAGCCACTTATGTCAATGAGGGTCTTGCTTACCGGCTGGTCAAGGATTTTCGTGGTGTGCCTGAAGCTCTGCGTCTGAAAAATCGCTTGTCAGCTTCAGAAGAACAATATGTCAGAGAGTTATTCTTTGATTTGTGTCCTTTCTTAAAATTCGCTTTTGTAACCACAAATCAAGCTATTGCTGAAGCCATGGAAGGGGAGAAGGTGATTCATATCATTGATCTTAATGCATCTGATCCTGCTCAGTGGATTAATCTTCTCCATATTTTAAAAGAACGTCGAAGAAACCTACCTTTTCTGAAAATTACAGGCATCCATGAGAGCAAAGAGCTTTTAAACCAAACTGGGTTTAAGTTGATAAGAGAAGCTGAAGAATTGAATTTCCCTTTCCACTTCTATGGTATTGTTAGCGAATTGGAGAATCTTAGCTTTGAAAAGTTGCCTGTGAAGCAAGGGGAGCCTCTTGCAATCAGTTCTGTACTTCAGTTGCATCCTCTTCTGGCAACTAATGATAATCAGGTGGTCAGCAACAGGAACTCACCTGCAGCAGCATCATCATCAACGGATCAACGGAGTTCGGCAGACTGGCCTGGGAAATTTGGGATGAGACCGAGTCCTGATTCGGCTTTGTCACCTCCTTCTCAATGTGCTTCACCTAAGATGGAGTCATTCTTAAATGGGTTGTGGAATCTCCGGCCCAGATTGATGGTCATTACTGAACAAGAATCAAATGCTAATGGGTCTACCTTGATGGACAGGCTTGACAAGGCACTGAACTTTTATGGTGCACTGTTTGATTGCTTGGAAGAAACTGTTCCAAAAGCAAGAGCAGTAGAGAGAATAACACTGGAGAGGATGCTTCTTGGGGAGGAAATAAGGAACATAATAGCATGTGAGGGAGTTGAGAGAAAAGAGAGGCATGAGAAAGTTGATACATGGATTCCATGGCTTGAATTGGCTGGATTCCAGAGGGTACCTATCAGCTATGAGAAGATGTTGGAGGCAACGAGGCCATTGCAAAGCTATGGGCGTGGATTCAAGCTCCTAGAGGATAAGAATTGTCTTTTTATCTGCTGGAATTATATACCCCTCTATTCTATATCAGCCTGGAGAGTGGAAATGATTAAAAGGAGCAATATACGAGGTGCACCATACCAGTTGTTCACAGACATGAAATTGGAAGACATGGGCATATGTTTGGCCCGTCTTCTTCTGAACTGTGCTAAGCATATTGAAACTGGAAACGTCATGAATGCAGGTATTGGACTTCAGAACATTGCCATCCTTGCCTCCCTTGATGGTGATGCACTGCAGAGGGTAGCCACTTGTGTCAATGTTGGACTTGCTTACCGACTGGCCATTGCTGAAGCCATGGAAGGGGAACAAGTGATTCCTATCATTGACCTCAATGAATCTAATCCTGCTTAG 1632 0.4387 MIKKSDSSGSASTCQWLTQMKWENRGIYLARLLPTCAKYTEAGNINNAGTGLKNIATLASPDGDALQRVATYVNEGLAYRLVKDFRGVPEALRLKNRLSASEEQYVRELFFDLCPFLKFAFVTTNQAIAEAMEGEKVIHIIDLNASDPAQWINLLHILKERRRNLPFLKITGIHESKELLNQTGFKLIREAEELNFPFHFYGIVSELENLSFEKLPVKQGEPLAISSVLQLHPLLATNDNQVVSNRNSPAAASSSTDQRSSADWPGKFGMRPSPDSALSPPSQCASPKMESFLNGLWNLRPRLMVITEQESNANGSTLMDRLDKALNFYGALFDCLEETVPKARAVERITLERMLLGEEIRNIIACEGVERKERHEKVDTWIPWLELAGFQRVPISYEKMLEATRPLQSYGRGFKLLEDKNCLFICWNYIPLYSISAWRVEMIKRSNIRGAPYQLFTDMKLEDMGICLARLLLNCAKHIETGNVMNAGIGLQNIAILASLDGDALQRVATCVNVGLAYRLAIAEAMEGEQVIPIIDLNESNPA 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0442 543 ProSiteProfiles GRAS family profile. 20 439 IPR005202 -
Glsi14g0442 543 MobiDBLite consensus disorder prediction 244 262 - -
Glsi14g0442 543 ProSiteProfiles GRAS family profile. 459 543 IPR005202 -
Glsi14g0442 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 28 434 IPR005202 -
Glsi14g0442 543 MobiDBLite consensus disorder prediction 244 285 - -
Glsi14g0442 543 Pfam GRAS domain family 30 439 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0442 Glsi-ChrGlsi14 5589630 5594903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0442 450 543 GRAS Transcription Factor Family AT1G50420 29.787 1.00e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi14g0442 GRAS 3.7e-109 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0442 14 5589630 5594903 Glsi14g0442 14 5589630 5594903 ECH